RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 IFT46Q9NQC8 304 aa14.8□□□□□ -0.04
GCOM1-210ENST00000488175 PRTFDC1Q9NRG1 225 aa14.8□□□□□ -0.04
GCOM1-210ENST00000488175 FARSAQ9Y285 508 aaKnown RBP14.8□□□□□ -0.04
GCOM1-210ENST00000488175 CLDN16Q9Y5I7 305 aa14.8□□□□□ -0.04
GCOM1-210ENST00000488175 ARID1BQ8NFD5 2236 aaPredicted RBP14.8□□□□□ -0.04
GCOM1-210ENST00000488175 LOC100289279A0A1B0GTE1 492 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 SRPX2O60687 465 aaPredicted RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 ALOX12BO75342 701 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 ZNF432O94892 652 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 IFI6P09912 130 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 EGR3Q06889 387 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 RASGEF1BQ0VAM2 473 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 EIF2B5Q13144 721 aaKnown RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 ATXN7L3Q14CW9 347 aaPredicted RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 NR0B2Q15466 257 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 MPPED2Q15777 294 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 STEAP2Q8NFT2 490 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 OR1J4Q8NGS1 313 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 GPX8Q8TED1 209 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 SEH1LQ96EE3 360 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 SEC22AQ96IW7 307 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 CCSO14618 274 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 RENP00797 406 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 AMY2AP04746 511 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 ITGB2P05107 769 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 GUSBP08236 651 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 PNMTP11086 282 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 RNH1P13489 461 aaKnown RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 APEHP13798 732 aaKnown RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 EEF1A1P5Q5VTE0 462 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 OR10K2Q6IF99 312 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 NDUFAF7Q7L592 441 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 MDGA2Q7Z553 956 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 OR1J2Q8NGS2 313 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 ZNF563Q8TA94 476 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 SFXN1Q9H9B4 322 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 CGGBP1Q9UFW8 167 aaPredicted RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 MPDZO75970 2070 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 FAM74A7A6NL05 159 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 H3BUI4 141 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 SLC17A2O00624 439 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 KLF8O95600 359 aaPredicted RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 HOXC4P09017 264 aaPredicted RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 TACR3P29371 465 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 GPM6BQ13491 265 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 SCGB2B2Q4G0G5 96 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 FAM74A3Q4VXF1 159 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 EIF4E3Q8N5X7 224 aaKnown RBP14.79□□□□□ -0.04
GCOM1-210ENST00000488175 ZNF321PQ8N8H1 164 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 OTOSQ8NHW6 89 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 LRRC46Q96FV0 321 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 ZNF75AQ96N20 296 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 TAS2R3Q9NYW6 316 aa14.79□□□□□ -0.04
GCOM1-210ENST00000488175 LOC100509620A0A075B734 347 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 C5orf67F2Z3F1 127 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 DNASE2O00115 360 aaPredicted RBP14.78□□□□□ -0.04
GCOM1-210ENST00000488175 TPPPO94811 219 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 WISP1O95388 367 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 ZNF28P17035 718 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 PBX2P40425 430 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 LUMP51884 338 aaPredicted RBP14.78□□□□□ -0.04
GCOM1-210ENST00000488175 SCAND1P57086 179 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 SKP2Q13309 424 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 SQSTM1Q13501 440 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 TAF13Q15543 124 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 GLYATL3Q5SZD4 288 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 TMEM184AQ6ZMB5 413 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 Q6ZSR6 202 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 OOSP2Q86WS3 158 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 MARC2Q969Z3 335 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 NARS2Q96I59 477 aaKnown RBP14.78□□□□□ -0.04
GCOM1-210ENST00000488175 DCDC2BA2VCK2 349 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 OR5H14A6NHG9 310 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 PMS2P2O95744 297 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 TXNDC12O95881 172 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 C1orf61Q13536 156 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 LIN54Q6MZP7 749 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 MCATQ8IVS2 390 aaKnown RBP14.78□□□□□ -0.04
GCOM1-210ENST00000488175 PRR22Q8IZ63 422 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 ARHGEF39Q8N4T4 335 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 MNTQ99583 582 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 RTN4RQ9BZR6 473 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 TMEM14AQ9Y6G1 99 aa14.78□□□□□ -0.04
GCOM1-210ENST00000488175 MGMTP16455 207 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 HNRNPA2B1P22626 353 aaKnown RBP14.77□□□□□ -0.04
GCOM1-210ENST00000488175 STARP49675 285 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 TAS2R19P59542 299 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 MFGE8Q08431 387 aaPredicted RBP14.77□□□□□ -0.04
GCOM1-210ENST00000488175 SLC17A1Q14916 467 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 NKPD1Q17RQ9 610 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 ZNF615Q8N8J6 731 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 ZSCAN1Q8NBB4 408 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 OR4S1Q8NGB4 309 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 LIPHQ8WWY8 451 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 SLC25A36Q96CQ1 311 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 SLC25A32Q9H2D1 315 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 C1orf198Q9H425 327 aa14.77□□□□□ -0.04
GCOM1-210ENST00000488175 YBX2Q9Y2T7 364 aaKnown RBP14.77□□□□□ -0.04
GCOM1-210ENST00000488175 PCP4L1A6NKN8 68 aa14.77□□□□□ -0.05
GCOM1-210ENST00000488175 EIF4E2O60573 245 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms