RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 TBC1D28Q2M2D7 210 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC36A2Q495M3 483 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 TYW3Q6IPR3 259 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC2A7Q6PXP3 512 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 APOOLQ6UXV4 268 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 RBMS3Q6XE24 437 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 Q6YL49 198 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 FRRS1Q6ZNA5 592 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 MAVSQ7Z434 540 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 C6orf120Q7Z4R8 191 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 LRRC28Q86X40 367 aaPredicted RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 EPHX4Q8IUS5 362 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 PEX5LQ8IYB4 626 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ADGRG5Q8IZF4 528 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 C1orf87Q8N0U7 546 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 GPR137CQ8N3F9 429 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF525Q8N782 197 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CCDC54Q8NEL0 328 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 MGARPQ8TDB4 240 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC47A1Q96FL8 570 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 COQ7Q99807 217 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC30A2Q9BRI3 323 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 MCRIP2Q9BUT9 160 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM38AQ9H6F2 299 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 PPANQ9NQ55 473 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 NECAP2Q9NVZ3 263 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 NINJ2Q9NZG7 142 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CPSF2Q9P2I0 782 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 P2RX2Q9UBL9 471 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF225Q9UK10 706 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SPTBN1Q01082 2364 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ITPR2Q14571 2701 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 LOC105371242A0A075B767 164 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 IGHV2-70DA0A0C4DH43 119 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 PRSS51A0A1B0GVH4 220 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 GXYLT2A0PJZ3 443 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 NPIPB6E9PJ23 425 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 G3V2L1 256 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 M0R1B8 84 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 M0R1W7 72 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CLOCKO15516 846 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ENSAO43768 121 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 UGT2B17O75795 530 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 FARS2O95363 451 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 RAB36O95755 333 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 C6orf47O95873 294 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CSTAP01040 98 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 NPPAP01160 153 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 IL6P05231 212 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ACAA1P09110 424 aaPredicted RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CTAGE8P0CG41 777 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CREB1P16220 341 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 EPHA3P29320 983 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 DAP3P51398 398 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 KLF3P57682 345 aaPredicted RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 HPCAP84074 193 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ID2Q02363 134 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ECH1Q13011 328 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CD226Q15762 336 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF124Q15973 351 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 UGT3A2Q3SY77 523 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM176BQ3YBM2 270 aaPredicted RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 COQ5Q5HYK3 327 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 FGD3Q5JSP0 725 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 NCR3LG1Q68D85 454 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM107Q6UX40 140 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CCDC80Q76M96 950 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 RNF130Q86XS8 419 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 NDUFA11Q86Y39 141 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CTAGE4Q8IX94 777 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SPATA4Q8NEY3 305 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 OR10Z1Q8NGY1 313 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 AGR3Q8TD06 166 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ST7LQ8TDW4 575 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 WIPF2Q8TF74 440 aaPredicted RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ABHD3Q8WU67 409 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SSMEM1Q8WWF3 244 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ROPN1LQ96C74 230 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 RNF31Q96EP0 1072 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 OR2M2Q96R28 347 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SIKE1Q9BRV8 207 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 DESI2Q9BSY9 194 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF426Q9BUY5 554 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 BPESC1Q9GZL8 116 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 MEGF9Q9H1U4 602 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 DPAGT1Q9H3H5 408 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 DYNLRB1Q9NP97 96 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 DDX28Q9NUL7 540 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 POFUT2Q9Y2G5 429 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 NPTNQ9Y639 398 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 MYO7BQ6PIF6 2116 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SPTAN1Q13813 2472 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM72A0PK05 275 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM247A6NEH6 219 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ACOD1A6NK06 481 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 DBX1A6NMT0 343 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 PLIN3O60664 434 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 OR4F21O95013 312 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 TGFAP01135 160 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms