RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 OR4A8P0C604 315 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 THBS4P35443 961 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 MAGEA2P43356 314 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 MRPS34P82930 218 aaKnown RBP20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 CHRNB3Q05901 458 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 DAG1Q14118 895 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 ADIPOQQ15848 244 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 FAM98BQ52LJ0 330 aaKnown RBP20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 SMARCD3Q6STE5 483 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 ZNF584Q8IVC4 421 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 FNDC8Q8TC99 324 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 NABP1Q96AH0 204 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 TRIM15Q9C019 465 aa20.49■□□□□ 0.87
RHBDD3-205ENST00000488106 TNFRSF11BO00300 401 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 PPP1R3DO95685 299 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 FPR3P25089 353 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 SDHAP31040 664 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 SERPINF1P36955 418 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 IFNGR2P38484 337 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 SNRPD2P62316 118 aaKnown RBP20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 DPPA2Q7Z7J5 298 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 CIARTQ8N365 385 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 OR9Q2Q8NGE9 314 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 GPX7Q96SL4 187 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 KCNN2Q9H2S1 579 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 SIAEQ9HAT2 523 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 CCNB1IP1Q9NPC3 277 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 NRIP3Q9NQ35 241 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 IER3IP1Q9Y5U9 82 aa20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 YLPM1P49750 1951 aaKnown RBP20.48■□□□□ 0.87
RHBDD3-205ENST00000488106 SLC22A23A1A5C7 686 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 ACOT8O14734 319 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 KRT36O76013 467 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 SERPINA5P05154 406 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 ZNF35P13682 527 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 NPR2P20594 1047 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 GALK2Q01415 458 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 PPP1R8Q12972 351 aaKnown RBP20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 CLEC12BQ2HXU8 276 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 PGBD2Q6P3X8 592 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 SLC30A7Q8NEW0 376 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 SLC7A6OSQ96CW6 309 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 C18orf12Q96KH6 178 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 BTBD10Q9BSF8 475 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 OR52D1Q9H346 318 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 ZNF442Q9H7R0 627 aa20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 BARX1Q9HBU1 254 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 NSD1Q96L73 2696 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-205ENST00000488106 CSPG4Q6UVK1 2322 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 PRSS37A4D1T9 235 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 H7C417 338 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 SMAD7O15105 426 aaKnown RBP20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 GPRIN2O60269 458 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 MMP7P09237 267 aaPredicted RBP20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 BMP4P12644 408 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 CCL2P13500 99 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 NR4A1P22736 598 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 RPS6KA3P51812 740 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 NUDT6P53370 316 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 HSF2Q03933 536 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 ETFDHQ16134 617 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 SWI5Q1ZZU3 235 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 MST1LQ2TV78 715 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 GPR139Q6DWJ6 353 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 DPY19L2P2Q6ZN68 376 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 GNPDA2Q8TDQ7 276 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 FOXN4Q96NZ1 517 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 BDH2Q9BUT1 245 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 RERGLQ9H628 205 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 VNN3Q9NY84 501 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 PMF1-BGLAPU3KQ54 211 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 U3KQV3 271 aa20.46■□□□□ 0.87
RHBDD3-205ENST00000488106 SSX4O60224 188 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 FOSL1P15407 271 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 ZNF32P17041 273 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 LAP3P28838 519 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 SLC6A6P31641 620 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 GUCA1AP43080 201 aaPredicted RBP20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 GSSP48637 474 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 TRAP1Q12931 704 aaKnown RBP20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 RAB35Q15286 201 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 OR2T5Q6IEZ7 315 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 C1orf94Q6P1W5 598 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 PAQR4Q8N4S7 273 aaPredicted RBP20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 OR4C15Q8NGM1 316 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 OR2T29Q8NH02 315 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 SAMD8Q96LT4 415 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 ERMAPQ96PL5 475 aaPredicted RBP20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 SMR3AQ99954 134 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 SYT4Q9H2B2 425 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 SPEF1Q9Y4P9 236 aa20.45■□□□□ 0.86
RHBDD3-205ENST00000488106 IQCMA0A1B0GVH7 501 aa20.44■□□□□ 0.86
RHBDD3-205ENST00000488106 B9A039 149 aa20.44■□□□□ 0.86
RHBDD3-205ENST00000488106 IMPA2O14732 288 aa20.44■□□□□ 0.86
RHBDD3-205ENST00000488106 DNAJC8O75937 253 aaPredicted RBP20.44■□□□□ 0.86
RHBDD3-205ENST00000488106 CCNB2O95067 398 aa20.44■□□□□ 0.86
RHBDD3-205ENST00000488106 INHBBP09529 407 aa20.44■□□□□ 0.86
RHBDD3-205ENST00000488106 RAP2AP10114 183 aa20.44■□□□□ 0.86
RHBDD3-205ENST00000488106 CTLA4P16410 223 aa20.44■□□□□ 0.86
RHBDD3-205ENST00000488106 APEX1P27695 318 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms