RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 TOP1MTQ969P6 601 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 MAGOHBQ96A72 148 aaKnown RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 NTAN1Q96AB6 310 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 RPUSD4Q96CM3 377 aaKnown RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 SNF8Q96H20 258 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 PGLYRP4Q96LB8 373 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 RPRD1AQ96P16 312 aaPredicted RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 CSPG4P5Q96PW8 444 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 TGS1Q96RS0 853 aaKnown RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 FICDQ9BVA6 458 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 FBXO44Q9H4M3 255 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 PATZ1Q9HBE1 687 aaKnown RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 CSNK1G1Q9HCP0 422 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 NGBQ9NPG2 151 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 CYTL1Q9NRR1 136 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 UXTQ9UBK9 157 aaPredicted RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 RNF14Q9UBS8 474 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 MTRF1LQ9UGC7 380 aaKnown RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 WARS2Q9UGM6 360 aaKnown RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 LSM7Q9UK45 103 aaKnown RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 KIAA1257Q9ULG3 409 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 TP53TG5Q9Y2B4 290 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 UTP11Q9Y3A2 253 aaKnown RBP2.44□□□□□ -2.02
LINC00888-204ENST00000487386 MFHAS1Q9Y4C4 1052 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 HEY1Q9Y5J3 304 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 SNX10Q9Y5X0 201 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 ALG6Q9Y672 507 aa2.44□□□□□ -2.02
LINC00888-204ENST00000487386 COL4A2P08572 1712 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 CEP350Q5VT06 3117 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 MIA3Q5JRA6 1907 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 MTCL1Q9Y4B5 1905 aaKnown RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 TRAV19A0A0A6YYK7 116 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 IGHV2-70DA0A0C4DH43 119 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 NKX2-6A6NCS4 301 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 GOLGA6L10A6NI86 522 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 GJE1A6NN92 205 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 DFFAO00273 331 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 NDC80O14777 642 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 CHADO15335 359 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 COCHO43405 550 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 LANCL1O43813 399 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 RHOCP08134 193 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 COX7A1P24310 79 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 KDELR1P24390 212 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 COILP38432 576 aaPredicted RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 HNRNPA3P51991 378 aaKnown RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 AIF1P55008 147 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 MTTPP55157 894 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 GBE1Q04446 702 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 CUL1Q13616 776 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 ZNF235Q14590 738 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 PDK2Q15119 407 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 SLC25A52Q3SY17 297 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 DNAJC21Q5F1R6 531 aaKnown RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 BRMS1LQ5PSV4 323 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 RABGAP1LQ5R372 815 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 SYPL2Q5VXT5 272 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 TPGS2Q68CL5 300 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 CBLN3Q6UW01 205 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 FAM43BQ6ZT52 329 aaPredicted RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 C16orf62Q7Z3J2 963 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 ZNF429Q86V71 674 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 IFT20Q8IY31 132 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 H1FOOQ8IZA3 346 aaPredicted RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 MMGT1Q8N4V1 131 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 NPWQ8N729 165 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 ATP6V0D2Q8N8Y2 350 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 PRELID2Q8N945 189 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 ACTL9Q8TC94 416 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 IFT81Q8WYA0 676 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 ANKRD7Q92527 254 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 AKR1E2Q96JD6 320 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 NPY6RQ99463 290 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 POLR2J2Q9GZM3 115 aaKnown RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 POLR2J3Q9H1A7 115 aaKnown RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 RSPH9Q9H1X1 276 aaPredicted RBP2.43□□□□□ -2.02
LINC00888-204ENST00000487386 NEUROG2Q9H2A3 272 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 ZNF385DQ9H6B1 395 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 AIG1Q9NVV5 245 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 VANGL2Q9ULK5 521 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 SHROOM3Q8TF72 1996 aa2.43□□□□□ -2.02
LINC00888-204ENST00000487386 ZNF106Q9H2Y7 1883 aaKnown RBP2.42□□□□□ -2.02
LINC00888-204ENST00000487386 A6NDX4 124 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 HIDE1A8MVS5 230 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 GOLGA8MH3BSY2 632 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 KCNK1O00180 336 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 DNALI1O14645 258 aaPredicted RBP2.42□□□□□ -2.02
LINC00888-204ENST00000487386 BANF1O75531 89 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 UGT2B17O75795 530 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 ZNF189O75820 626 aaPredicted RBP2.42□□□□□ -2.02
LINC00888-204ENST00000487386 IGLV3-25P01717 112 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 KRT14P02533 472 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 IVLP07476 585 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 SLC2A3P11169 496 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 CCNCP24863 283 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 ATP6V1E1P36543 226 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 IFNAR2P48551 515 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 TUFMP49411 452 aaKnown RBP2.42□□□□□ -2.02
LINC00888-204ENST00000487386 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
LINC00888-204ENST00000487386 KDSRQ06136 332 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms