RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 PSKH1P11801 424 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 B4GALT1P15291 398 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 LAP3P28838 519 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 FMO3P31513 532 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 CCKARP32238 428 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 CDAP32320 146 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 SLC15A1P46059 708 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 CENPAP49450 140 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF84P51523 738 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 BLVRAP53004 296 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 NUDT6P53370 316 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 SH3BGRP55822 239 aaPredicted RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 CXCR4P61073 352 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 MRPS34P82930 218 aaKnown RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 HSF2Q03933 536 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 TMED1Q13445 227 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 MED21Q13503 144 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 P2RY6Q15077 328 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 CDSNQ15517 529 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 KCNMB1Q16558 191 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 SLC25A35Q3KQZ1 300 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 FBXL19-AS1Q494R0 122 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 KLHL12Q53G59 568 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 C6orf141Q5SZD1 244 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 LCN1P1Q5VSP4 162 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 KRT80Q6KB66 452 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 B3GLCTQ6Y288 498 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 BEND4Q6ZU67 534 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 LUZP2Q86TE4 346 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 GLB1L2Q8IW92 636 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 TIGD4Q8IY51 512 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 C1orf162Q8NEQ5 155 aaPredicted RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 OR6K6Q8NGW6 343 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 ASB5Q8WWX0 329 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 RFKQ969G6 155 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 ZMYND19Q96E35 227 aaPredicted RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 TEAD3Q99594 435 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 RBM24Q9BX46 236 aaKnown RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 RERGLQ9H628 205 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 POLE4Q9NR33 117 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 WARS2Q9UGM6 360 aaKnown RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 ERRFI1Q9UJM3 462 aaPredicted RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 SLC5A6Q9Y289 635 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 PHF3Q92576 2039 aaKnown RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 ARHGAP21Q5T5U3 1957 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 A0A1W2PPL8 197 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 SNTNA6NMZ2 147 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 SLC1A7O00341 560 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 SEC14L2O76054 403 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 MPZL1O95297 269 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 CCDC159P0C7I6 412 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 PIPP12273 146 aaPredicted RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 NPR2P20594 1047 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 PSMB1P20618 241 aaKnown RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 AGAP20933 346 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 MSR1P21757 451 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 MTNR1AP48039 350 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 ASCL1P50553 236 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 RPS7P62081 194 aaKnown RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 ARF1P84077 181 aaKnown RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 GTF3C1Q12789 2109 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 POU4F2Q12837 409 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 MEP1BQ16820 701 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 PCK2Q16822 640 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 C9orf135Q5VTT2 229 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 KLHL24Q6TFL4 600 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 STAC2Q6ZMT1 411 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 CXorf67Q86X51 503 aaPredicted RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF433Q8N7K0 673 aaPredicted RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF511Q8NB15 262 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 OR1K1Q8NGR3 316 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 LILRB4Q8NHJ6 448 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 ITLN2Q8WWU7 325 aaPredicted RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 C11orf40Q8WZ69 217 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 HTRA1Q92743 480 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 FOXN4Q96NZ1 517 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 CNN2Q99439 309 aaKnown RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 RHNO1Q9BSD3 238 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 WDR76Q9H967 626 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 SIAEQ9HAT2 523 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 ADGRL4Q9HBW9 690 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 PLCXD1Q9NUJ7 323 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 MRPS18AQ9NVS2 196 aaKnown RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 FKBP14Q9NWM8 211 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 COQ3Q9NZJ6 369 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF224Q9NZL3 707 aa8.4□□□□□ -1.06
MCF2L-227ENST00000486806 RPL36Q9Y3U8 105 aaKnown RBP8.4□□□□□ -1.06
MCF2L-227ENST00000486806 ZGRF1Q86YA3 2104 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 MED12LQ86YW9 2145 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 TVP23AA6NH52 213 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 J3QRE1 110 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 XPNPEP2O43895 674 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 SELENOFO60613 162 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 ZG16O60844 167 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 LYZL6O75951 148 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 SBK2P0C263 348 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 PLA2G2AP14555 144 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 CRHBPP24387 322 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 ENTPD1P49961 510 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms