RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TMEM255AQ5JRV8 349 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 C22orf42Q6IC83 251 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 REEP3Q6NUK4 255 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 Q6ZSR3 168 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 STRADAQ7RTN6 431 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 SSX9Q7RTT3 188 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 IQCKQ8N0W5 287 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 BBOF1Q8ND07 529 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 OR5B3Q8NH48 314 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 EXOSC8Q96B26 276 aaKnown RBP3.01□□□□□ -1.93
SMC4-218ENST00000486711 FAM3DQ96BQ1 224 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 SERPINB12Q96P63 405 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 GSDMAQ96QA5 445 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 PANX1Q96RD7 426 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 SLC25A39Q9BZJ4 359 aaPredicted RBP3.01□□□□□ -1.93
SMC4-218ENST00000486711 OR51M1Q9H341 326 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 CDC42EP4Q9H3Q1 356 aaKnown RBP3.01□□□□□ -1.93
SMC4-218ENST00000486711 KCNJ16Q9NPI9 418 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 GPATCH2LQ9NWQ4 482 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 HRASLS2Q9NWW9 162 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 ZNF629Q9UEG4 869 aaPredicted RBP3.01□□□□□ -1.93
SMC4-218ENST00000486711 VANGL2Q9ULK5 521 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 TMED5Q9Y3A6 229 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 RLFQ13129 1914 aa3.01□□□□□ -1.93
SMC4-218ENST00000486711 TDRD6O60522 2096 aaKnown RBP3□□□□□ -1.93
SMC4-218ENST00000486711 CEMIPQ8WUJ3 1361 aa3□□□□□ -1.93
SMC4-218ENST00000486711 IGHV3-64DA0A0J9YX35 117 aa3□□□□□ -1.93
SMC4-218ENST00000486711 MYL2P10916 166 aa3□□□□□ -1.93
SMC4-218ENST00000486711 HOXA9P31269 272 aa3□□□□□ -1.93
SMC4-218ENST00000486711 HRH1P35367 487 aa3□□□□□ -1.93
SMC4-218ENST00000486711 CYB561P49447 251 aa3□□□□□ -1.93
SMC4-218ENST00000486711 CCR6P51684 374 aa3□□□□□ -1.93
SMC4-218ENST00000486711 SLC7A9P82251 487 aa3□□□□□ -1.93
SMC4-218ENST00000486711 IL18Q14116 193 aa3□□□□□ -1.93
SMC4-218ENST00000486711 ALKBH6Q3KRA9 238 aa3□□□□□ -1.93
SMC4-218ENST00000486711 LY6G6FQ5SQ64 297 aa3□□□□□ -1.93
SMC4-218ENST00000486711 TTC23LQ6PF05 361 aa3□□□□□ -1.93
SMC4-218ENST00000486711 ZNF493Q6ZR52 646 aa3□□□□□ -1.93
SMC4-218ENST00000486711 LINC00173Q6ZV60 143 aa3□□□□□ -1.93
SMC4-218ENST00000486711 DUSP18Q8NEJ0 188 aa3□□□□□ -1.93
SMC4-218ENST00000486711 TSEN15Q8WW01 171 aaKnown RBP3□□□□□ -1.93
SMC4-218ENST00000486711 TAAR1Q96RJ0 339 aa3□□□□□ -1.93
SMC4-218ENST00000486711 C11orf70Q9BRQ4 267 aa3□□□□□ -1.93
SMC4-218ENST00000486711 MTG1Q9BT17 334 aaPredicted RBP3□□□□□ -1.93
SMC4-218ENST00000486711 MRPL37Q9BZE1 423 aaKnown RBP3□□□□□ -1.93
SMC4-218ENST00000486711 LINC00597Q9H2U6 94 aa3□□□□□ -1.93
SMC4-218ENST00000486711 LYARQ9NX58 379 aaKnown RBP3□□□□□ -1.93
SMC4-218ENST00000486711 CD84Q9UIB8 345 aa3□□□□□ -1.93
SMC4-218ENST00000486711 F11RQ9Y624 299 aaKnown RBP3□□□□□ -1.93
SMC4-218ENST00000486711 WSB1Q9Y6I7 421 aa3□□□□□ -1.93
SMC4-218ENST00000486711 COL4A4P53420 1690 aaPredicted RBP3□□□□□ -1.93
SMC4-218ENST00000486711 MEGF6O75095 1541 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 IGLV11-55A0A075B6I3 123 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 CASQ2O14958 399 aaPredicted RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 ICOSLGO75144 302 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 SS18L1O75177 396 aaPredicted RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 UTS2O95399 124 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 FGFR1OPO95684 399 aaKnown RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 RAB3DO95716 219 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 SERPINA5P05154 406 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 FABP3P05413 133 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 ACSM4P0C7M7 580 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 FOLR1P15328 257 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 ZNF250P15622 560 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 HMOX2P30519 316 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 AQP2P41181 271 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 NCBP2P52298 156 aaKnown RBP eCLIP2.99□□□□□ -1.93
SMC4-218ENST00000486711 HERVK_113P61574 105 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 PAX5Q02548 391 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 GGTLC2Q14390 218 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 ZSCAN26Q16670 478 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 KCTD19Q17RG1 926 aaPredicted RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 SOHLH1Q5JUK2 328 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 ANKRD22Q5VYY1 191 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 TWF2Q6IBS0 349 aaKnown RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 SCD5Q86SK9 330 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 ZNF433Q8N7K0 673 aaPredicted RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 LKAAEAR1Q8TD35 194 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 DNAJC1Q96KC8 554 aaKnown RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 IFI27L2Q9H2X8 130 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 GEMIN7Q9H840 131 aaKnown RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 LGALS13Q9UHV8 139 aa2.99□□□□□ -1.93
SMC4-218ENST00000486711 PRG3Q9Y2Y8 225 aaPredicted RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 CAB39Q9Y376 341 aaPredicted RBP2.99□□□□□ -1.93
SMC4-218ENST00000486711 LYRM9A8MSI8 78 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 TMX2-CTNND1H3BSU7 103 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 EIF3HO15372 352 aaKnown RBP eCLIP2.98□□□□□ -1.93
SMC4-218ENST00000486711 KLHL41O60662 606 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 DPM1O60762 260 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 HUS1O60921 280 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 OR2F2O95006 317 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 RETP07949 1114 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 ANXA8P13928 327 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 OMGP23515 440 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 UQCRFS1P47985 274 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 ATP5OP48047 213 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 MNAT1P51948 309 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 CRISP3P54108 245 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 EIF3EP60228 445 aaKnown RBP2.98□□□□□ -1.93
SMC4-218ENST00000486711 STXBP1P61764 594 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms