RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ANKRD26P1Q6NSI1 321 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 FAM45BPQ6NSW5 357 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 SBSNQ6UWP8 590 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 GLDNQ6ZMI3 551 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-209ENST00000486618 PGAP1Q75T13 922 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 SSX9Q7RTT3 188 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 LYSMD2Q8IV50 215 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 ACOT4Q8N9L9 421 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 SYT8Q8NBV8 401 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 ADPRHL1Q8NDY3 354 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 OR4A15Q8NGL6 344 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 OR1J4Q8NGS1 313 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 TRMT10AQ8TBZ6 339 aaKnown RBP6.03□□□□□ -1.44
HDAC3-209ENST00000486618 FAM45AQ8TCE6 357 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 PNPT1Q8TCS8 783 aaKnown RBP6.03□□□□□ -1.44
HDAC3-209ENST00000486618 SPPL2AQ8TCT8 520 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 BORCS5Q969J3 196 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 S100PBPQ96BU1 408 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 F2RL3Q96RI0 385 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 MAPKAP1Q9BPZ7 522 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 KATNB1Q9BVA0 655 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 NMNAT2Q9BZQ4 307 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 WWTR1Q9GZV5 400 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 SLITRK2Q9H156 845 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 CNOT10Q9H9A5 744 aaKnown RBP6.03□□□□□ -1.44
HDAC3-209ENST00000486618 TEX10Q9NXF1 929 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-209ENST00000486618 ELOVL5Q9NYP7 299 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 SLC17A7Q9P2U7 560 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 ABCD2Q9UBJ2 740 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 FLVCR2Q9UPI3 526 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 RASD1Q9Y272 281 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 VWA7Q9Y334 891 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 STARD10Q9Y365 291 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 GMPPBQ9Y5P6 360 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 NPTNQ9Y639 398 aa6.03□□□□□ -1.44
HDAC3-209ENST00000486618 RAI1Q7Z5J4 1906 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-209ENST00000486618 C7orf72A4D263 438 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 TMEM238C9JI98 176 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 C9JVG2 144 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 C16orf97H3BN30 126 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 HSPA12AO43301 675 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ZSCAN12O43309 604 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 FGF17O60258 216 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 OR10H2O60403 315 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 RAD51DO75771 328 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 GLCEO94923 617 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 APOL3O95236 402 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 TBX6O95947 436 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 SAGP10523 405 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 PGAM1P18669 254 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 HIST1H1TP22492 207 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ATP5A1P25705 553 aaKnown RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 CDKN1AP38936 164 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 OMPP47874 163 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 CNN1P51911 297 aaKnown RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 SLC37A1P57057 533 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 FBXW4P57775 412 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ATP6V0D1P61421 351 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 HERVK_113P63132 956 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ERVK-8P63133 956 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 SRYQ05066 204 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 KRTAP1-1Q07627 177 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 FAM27E3Q08E93 113 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 TNK1Q13470 666 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 EBPQ15125 230 aaKnown RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ZNHIT3Q15649 155 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 VAMP3Q15836 100 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 PSG3Q16557 428 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 C5orf64Q2M2E5 130 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ALKBH6Q3KRA9 238 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 TMEM35AQ53FP2 167 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 XKR7Q5GH72 579 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 FNDC7Q5VTL7 733 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ANKRD22Q5VYY1 191 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 CHMP1BQ7LBR1 199 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 P4HA3Q7Z4N8 544 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ADGRE4PQ86SQ3 457 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 OR4N5Q8IXE1 308 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 GCNT2Q8N0V5 402 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 FAM83FQ8NEG4 500 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 OR2D3Q8NGH3 330 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 TCP10LQ8TDR4 215 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 RASSF5Q8WWW0 418 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 RIT1Q92963 219 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 UBE2E3Q969T4 207 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ST6GALNAC6Q969X2 333 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 PPWD1Q96BP3 646 aaKnown RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 REPS1Q96D71 796 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 PTCD3Q96EY7 689 aaKnown RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 DUX5Q96PT3 197 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 CPPED1Q9BRF8 314 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 CENPKQ9BS16 269 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 EFCAB11Q9BUY7 163 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 ERVK-6Q9BXR3 956 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 BCL2L14Q9BZR8 327 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 METTL9Q9H1A3 318 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 RPF2Q9H7B2 306 aaKnown RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 VIPAS39Q9H9C1 493 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 HHATLQ9HCP6 504 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 CHMP1AQ9HD42 196 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms