RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 PCBP4P57723 403 aaKnown RBP10.07□□□□□ -0.8
HDAC6-228ENST00000486227 PCBD1P61457 104 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 IFITM2Q01629 132 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 GRINAQ7Z429 371 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 GLCCI1Q86VQ1 547 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 LINC00346Q8IVM7 164 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 DEFB124Q8NES8 71 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 GPR32P1Q8NGA4 272 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 OR9K2Q8NGE7 335 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 OR14A2Q96R54 314 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 PHB2Q99623 299 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 ZNF442Q9H7R0 627 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 WIF1Q9Y5W5 379 aa10.07□□□□□ -0.8
HDAC6-228ENST00000486227 MYOFQ9NZM1 2061 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 BORCS7-ASMTA0A0B4J1R7 106 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 LOC102725191A0A1B0GVB3 256 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 CRTAPO75718 401 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-228ENST00000486227 EML2O95834 649 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 EMDP50402 254 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 CCL7P80098 99 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 S100A12P80511 92 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 RSU1Q15404 277 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 MEP1BQ16820 701 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 NDUFAF7Q7L592 441 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 AAED1Q7RTV5 226 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 LGALS14Q8TCE9 139 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 DYNLRB1Q9NP97 96 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 CMC2Q9NRP2 79 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 GPATCH2Q9NW75 528 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 A4GNTQ9UNA3 340 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 NUDT21O43809 227 aaKnown RBP10.06□□□□□ -0.8
HDAC6-228ENST00000486227 ICOSLGO75144 302 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 ATP1B1P05026 303 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 HOXC4P09017 264 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-228ENST00000486227 HIST1H1CP16403 213 aaKnown RBP10.06□□□□□ -0.8
HDAC6-228ENST00000486227 HOXB9P17482 250 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-228ENST00000486227 SRP9P49458 86 aaKnown RBP10.06□□□□□ -0.8
HDAC6-228ENST00000486227 SLC35A1P78382 337 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 FABP5Q01469 135 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 C9orf135Q5VTT2 229 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 BBS1Q8NFJ9 593 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-228ENST00000486227 WDR76Q9H967 626 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 IGHV5-51A0A0C4DH38 117 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 PRSS44E7EML9 344 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 GPR171O14626 319 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 HTR3BO95264 441 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 MT-CO3P00414 261 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 P2RX1P51575 399 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 SSX1Q16384 188 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 OR5D14Q8NGL3 314 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 APH1BQ8WW43 257 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 TAAR9Q96RI9 348 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 PDCD1LG2Q9BQ51 273 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 ZNF700Q9H0M5 742 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 FAM60AQ9NP50 221 aa10.06□□□□□ -0.8
HDAC6-228ENST00000486227 GLCEO94923 617 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 ADRB1P08588 477 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 HCCSP53701 268 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 ZNF425Q6IV72 752 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 GLB1L2Q8IW92 636 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 C10orf111Q8N326 155 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 OR5M1Q8NGP8 315 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 OR11A1Q9GZK7 315 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 NOX4Q9NPH5 578 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 A0A1W2PQF6 199 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 ZNF850A8MQ14 1090 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 MSX1P28360 303 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 SLC26A5P58743 744 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 DEFB109BQ30KR1 87 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 KIRREL2Q6UWL6 708 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 TMUB2Q71RG4 321 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 LRRC18Q8N456 261 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 PPP1R35Q8TAP8 253 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 C1orf198Q9H425 327 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 ASXL3Q9C0F0 2248 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 PRRG2O14669 202 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 KLK10O43240 276 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 AKR7A3O95154 331 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 SOD1P00441 154 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 TP53P04637 393 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-228ENST00000486227 ZNF16P17020 682 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-228ENST00000486227 SEC61A1P61619 476 aaKnown RBP10.05□□□□□ -0.8
HDAC6-228ENST00000486227 VAMP2P63027 116 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 SLC22A6Q4U2R8 563 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 DNAAF1Q8NEP3 725 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 OR5L1Q8NGL2 311 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 GDF15Q99988 308 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 SEC22CQ9BRL7 303 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 MARVELD1Q9BSK0 173 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 EMC6Q9BV81 110 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 PRMT8Q9NR22 394 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-228ENST00000486227 FBXL2Q9UKC9 423 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 KLF13Q9Y2Y9 288 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-228ENST00000486227 D6RAR5 112 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 EIF1BO60739 113 aaKnown RBP10.05□□□□□ -0.8
HDAC6-228ENST00000486227 CRYBB2P43320 205 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 CARD18P57730 90 aa10.05□□□□□ -0.8
HDAC6-228ENST00000486227 TRA2AQ13595 282 aaKnown RBP eCLIP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms