RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 UPK3AO75631 287 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 PTHP01270 115 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 HRGP04196 525 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 LIMS3P0CW19 117 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 LIMS4P0CW20 117 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 EDN3P14138 238 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 C1orf185Q5T7R7 199 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 C9orf106Q8NAJ2 232 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 OR6N2Q8NGY6 317 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 SMAP2Q8WU79 429 aaPredicted RBP18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 ALKBH3Q96Q83 286 aaPredicted RBP18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 LINC00470Q9BZP3 86 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 WDR76Q9H967 626 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 ARHGAP21Q5T5U3 1957 aa18.08■□□□□ 0.48
VCPKMT-203ENST00000484763 ATRXP46100 2492 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 TMEM129A0AVI4 362 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 MBD3L4A6NDZ8 208 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 MBD3L3A6NE82 208 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 MBD3L5A6NJ08 208 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 PRRG2O14669 202 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 DHHO43323 396 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 HOXD4P09016 255 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 JUNBP17275 347 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 ADAM8P78325 824 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 RBPJQ06330 500 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 LHFPL3Q86UP9 236 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 NANOGP1Q8N7R0 232 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 MBD3L2Q8NHZ7 208 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 RORBQ92753 470 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 MNTQ99583 582 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 YIPF3Q9GZM5 350 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 EMC9Q9Y3B6 208 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 USP24Q9UPU5 2620 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 A0A1W2PQL4 384 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF823P16415 610 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 ALDH3B2P48448 385 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 ENTPD1P49961 510 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF84P51523 738 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 GUSBP1Q15486 140 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 TSPO2Q5TGU0 170 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 UBE2UQ5VVX9 321 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 RTL6Q6ICC9 239 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 FAM214BQ7L5A3 538 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 NUFIP2Q7Z417 695 aaKnown RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 CDC20BQ86Y33 519 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF100Q8IYN0 542 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 GCNT2Q8N0V5 402 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 MUL1Q969V5 352 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF649Q9BS31 505 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 RBM24Q9BX46 236 aaKnown RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 TP63Q9H3D4 680 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 SEC61A2Q9H9S3 476 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 UGT2A1Q9Y4X1 527 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 FAM215AQ9Y5M1 114 aa18.07■□□□□ 0.48
VCPKMT-203ENST00000484763 SLC19A2O60779 497 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 KRT33AO76009 404 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 MPZL1O95297 269 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 EDNRAP25101 427 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 HCCSP53701 268 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 GALEQ14376 348 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 MEP1BQ16820 701 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 ST3GAL2Q16842 350 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF367Q7RTV3 350 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 DPY19L4Q7Z388 723 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 KLHL36Q8N4N3 616 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 OR10H5Q8NGA6 315 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 ALG8Q9BVK2 526 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 CRLF2Q9HC73 371 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF835Q9Y2P0 537 aa18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 LSM2Q9Y333 95 aaKnown RBP18.06■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF99A8MXY4 864 aaPredicted RBP18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF670-ZNF695F2Z2N8 137 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF593O00488 134 aaPredicted RBP18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 LCKP06239 509 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 CDAP32320 146 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 GUCA1AP43080 201 aaPredicted RBP18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF85Q03923 595 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 MED22Q15528 200 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 FOXL2NBQ6ZUU3 175 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 CPT1CQ8TCG5 803 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 C11orf40Q8WZ69 217 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 C12orf49Q9H741 205 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 GPR35Q9HC97 309 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 SLC7A10Q9NS82 523 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 COPS3Q9UNS2 423 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 TMEM14AQ9Y6G1 99 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 INMTO95050 263 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 IGHV3-9P01782 118 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 SPARCP09486 303 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 RPS27P42677 84 aaKnown RBP18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 WNT4P56705 351 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 OTPQ5XKR4 325 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 SEM1Q6ZVN7 128 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 LINGO2Q7L985 606 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 RFLNBQ8N5W9 214 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 OR52N1Q8NH53 320 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 OTOSQ8NHW6 89 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 OR5M11Q96RB7 305 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms