RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 HDAC2Q92769 488 aaKnown RBP17.14■□□□□ 0.33
MSH5-215ENST00000482280 BCL2L14Q9BZR8 327 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 MYLK2Q9H1R3 596 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 OR51B6Q9H340 312 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 ABCD2Q9UBJ2 740 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 EGFL7Q9UHF1 273 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 FZR1Q9UM11 496 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 A0A096LNT2 108 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 A0A1W2PPL8 197 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 TMEM129A0AVI4 362 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 STAMBPO95630 424 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 IGHMP01871 453 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 H1F0P07305 194 aaKnown RBP17.13■□□□□ 0.33
MSH5-215ENST00000482280 ZNF16P17020 682 aaPredicted RBP17.13■□□□□ 0.33
MSH5-215ENST00000482280 ITGA2P17301 1181 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 MAKP20794 623 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 DRD4P21917 467 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 CDAP32320 146 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 GPR4P46093 362 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 CHN2P52757 468 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 PCBD1P61457 104 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 MXRA7P84157 204 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 FXNQ16595 210 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 MOGQ16653 247 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 FAM166AQ6J272 317 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 ZNF584Q8IVC4 421 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 OR13C2Q8NGS9 318 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 BEX2Q9BXY8 128 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 BPESC1Q9GZL8 116 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 NMNAT1Q9HAN9 279 aaPredicted RBP17.13■□□□□ 0.33
MSH5-215ENST00000482280 LPAR3Q9UBY5 353 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 KCNS2Q9ULS6 477 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 CSPG4Q6UVK1 2322 aa17.13■□□□□ 0.33
MSH5-215ENST00000482280 A0A087WUU8 490 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 VWC2LB2RUY7 222 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 FFAR1O14842 300 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 SNAP29O95721 258 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 IGHV4-31P0DP07 118 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 CCL2P13500 99 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 ALDH3B1P43353 468 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 GDI2P50395 445 aaKnown RBP17.12■□□□□ 0.33
MSH5-215ENST00000482280 ZNF133P52736 654 aaPredicted RBP17.12■□□□□ 0.33
MSH5-215ENST00000482280 KLF3P57682 345 aaPredicted RBP17.12■□□□□ 0.33
MSH5-215ENST00000482280 GNGT1P63211 74 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 FMODQ06828 376 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 ZBED5Q49AG3 693 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 PABPC1L2AQ5JQF8 200 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 PODNL1Q6PEZ8 512 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 MEX3DQ86XN8 651 aaKnown RBP17.12■□□□□ 0.33
MSH5-215ENST00000482280 PRIMA1Q86XR5 153 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 ZNF786Q8N393 782 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 SYNPRQ8TBG9 265 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 MCUR1Q96AQ8 359 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 LRRC37BQ96QE4 947 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 SHARPINQ9H0F6 387 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 MAN2C1Q9NTJ4 1040 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 NDE1Q9NXR1 346 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 SLCO1C1Q9NYB5 712 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 AURKCQ9UQB9 309 aa17.12■□□□□ 0.33
MSH5-215ENST00000482280 FN1P02751 2386 aaKnown RBP17.12■□□□□ 0.33
MSH5-215ENST00000482280 LOC100289279A0A1B0GTE1 492 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 DCTN3O75935 186 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 ZNF23P17027 643 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 RHCEP18577 417 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 TCN1P20061 433 aaPredicted RBP17.11■□□□□ 0.33
MSH5-215ENST00000482280 HNF1AP20823 631 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 STOMP27105 288 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 UCP2P55851 309 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 SMIM11AP58511 58 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 TMEM154Q6P9G4 183 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 TBPL2Q6SJ96 375 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 UGT2A3Q6UWM9 527 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 TMPRSS11FQ6ZWK6 438 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 RNF148Q8N7C7 305 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 ZNF519Q8TB69 540 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 TSPAN32Q96QS1 320 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 MAGEL2Q9UJ55 1249 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 ARL2BPQ9Y2Y0 163 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 NAV3Q8IVL0 2385 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 CR1P17927 2039 aa17.11■□□□□ 0.33
MSH5-215ENST00000482280 A0A1W2PRQ8 180 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 C12orf71A8MTZ7 269 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 LMX1BO60663 402 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 ZNF32P17041 273 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 GIFP27352 417 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 APEX1P27695 318 aaKnown RBP17.1■□□□□ 0.33
MSH5-215ENST00000482280 GCH1P30793 250 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 ERVK-25P63136 954 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 DGCR6Q14129 220 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 MAD2L1BPQ15013 274 aaPredicted RBP17.1■□□□□ 0.33
MSH5-215ENST00000482280 SAMD4BQ5PRF9 694 aaKnown RBP17.1■□□□□ 0.33
MSH5-215ENST00000482280 FAM27BQ5VT28 67 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 SLC25A47Q6Q0C1 308 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 ARL9Q6T311 187 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 ARIH2OSQ8N7S6 290 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 OR1J1Q8NGS3 322 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 FAM46AQ96IP4 442 aaKnown RBP17.1■□□□□ 0.33
MSH5-215ENST00000482280 ZNF570Q96NI8 536 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 CHODLQ9H9P2 273 aa17.1■□□□□ 0.33
MSH5-215ENST00000482280 DCAF13Q9NV06 445 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms