RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 SMUG1Q53HV7 270 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 FAM78AQ5JUQ0 283 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 SAXO2Q658L1 398 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 SLC25A48Q6ZT89 311 aaKnown RBP1.19□□□□□ -2.22
KDM1A-204ENST00000481879 EFL1Q7Z2Z2 1120 aaKnown RBP1.19□□□□□ -2.22
KDM1A-204ENST00000481879 UBALD2Q8IYN6 164 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 OR10R2Q8NGX6 335 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 ABHD3Q8WU67 409 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 ZNF382Q96SR6 550 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 SLC25A2Q9BXI2 301 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 LINC00597Q9H2U6 94 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 VCX2Q9H322 139 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 GPATCH2LQ9NWQ4 482 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 UVRAGQ9P2Y5 699 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 SLC7A8Q9UHI5 535 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 BLOC1S6Q9UL45 172 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 ATP6V0A2Q9Y487 856 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 TMEM14AQ9Y6G1 99 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 CNTNAP1P78357 1384 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 PNPLA6Q8IY17 1366 aa1.19□□□□□ -2.22
KDM1A-204ENST00000481879 PLA2R1Q13018 1463 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 TRAV39A0A0B4J263 110 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 RPL36A-HNRNPH2H7BZ11 118 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 NDC80O14777 642 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 RRP8O43159 456 aaKnown RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 SOX15O60248 233 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 SPAG6O75602 509 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 EIF3GO75821 320 aaKnown RBP eCLIP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 FGGP02679 453 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 OR56A5P0C7T3 313 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 POLR2MP0CAP2 368 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 RNASE2P10153 161 aaKnown RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 HNRNPH3P31942 346 aaKnown RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 HNMTP50135 292 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 TPMTP51580 245 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 GBX2P52951 348 aaPredicted RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 AIF1P55008 147 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 FBXW4P57775 412 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 CHIT1Q13231 466 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 GPM6BQ13491 265 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 ARHGAP19Q14CB8 494 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 RGNQ15493 299 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 SNRNP35Q16560 246 aaKnown RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 PRSS8Q16651 343 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 IMMTQ16891 758 aaKnown RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 RABL6Q3YEC7 729 aaPredicted RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 PTPN20Q4JDL3 420 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 PRMT9Q6P2P2 845 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 PLET1Q6UQ28 207 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 ABHD13Q7L211 337 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 NEGR1Q7Z3B1 354 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 ZNF547Q8IVP9 402 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 OSR2Q8N2R0 312 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 ARRDC1Q8N5I2 433 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 OR4F6Q8NGB9 312 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 RNF139Q8WU17 664 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 CREB3L1Q96BA8 519 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 TRIM44Q96DX7 344 aaPredicted RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 NPY6RQ99463 290 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 RNF5Q99942 180 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 SH3GL1Q99961 368 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 MFFQ9GZY8 342 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 SAV1Q9H4B6 383 aaPredicted RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 SGK2Q9HBY8 427 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 HMG20AQ9NP66 347 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 NT5MQ9NPB1 228 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 KCNJ16Q9NPI9 418 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 ZNF639Q9UID6 485 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 LSM7Q9UK45 103 aaKnown RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 DDX49Q9Y6V7 483 aaKnown RBP1.18□□□□□ -2.22
KDM1A-204ENST00000481879 PIKFYVEQ9Y2I7 2098 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 OTOGLQ3ZCN5 2332 aa1.18□□□□□ -2.22
KDM1A-204ENST00000481879 PCM1Q15154 2024 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 WDR62O43379 1518 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 KIR2DS1A0A191URI9 304 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 ARHGEF35A5YM69 484 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 GPR89AB7ZAQ6 455 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 DPM1O60762 260 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 GCM2O75603 506 aaPredicted RBP1.17□□□□□ -2.22
KDM1A-204ENST00000481879 CDRT1O95170 752 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 UBTFL6P0CB48 400 aaPredicted RBP1.17□□□□□ -2.22
KDM1A-204ENST00000481879 GPR89BP0CG08 455 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 CEACAM6P40199 344 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 EPS15P42566 896 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 KIR3DL2P43630 455 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 CX3CR1P49238 355 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 PRMT2P55345 433 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 KRTAP12-3P60328 96 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 KCNJ2P63252 427 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 ARG2P78540 354 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 KIR2DS1Q14954 304 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 PON2Q15165 354 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 PRR9Q5T870 116 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 ARL9Q6T311 187 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 TMEM205Q6UW68 189 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 PEX26Q7Z412 305 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 HDDC2Q7Z4H3 204 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 LRP11Q86VZ4 500 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 TGIF2LXQ8IUE1 241 aa1.17□□□□□ -2.22
KDM1A-204ENST00000481879 PDIK1LQ8N165 341 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms