RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 IGHV4-30-4P0DP06 118 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 SOX3P41225 446 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 RARRES1P49788 294 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 BLVRAP53004 296 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 UBE2KP61086 200 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 HSF1Q00613 529 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 RAB40BQ12829 278 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 GGTLC2Q14390 218 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUSP7Q16829 419 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 VPS26BQ4G0F5 336 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 PVRIGQ6DKI7 326 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 FAM122CQ6P4D5 195 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 FAM199XQ6PEV8 388 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 APRG1Q8IVJ8 170 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 MOCOSQ96EN8 888 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ULBP2Q9BZM5 246 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ILKAPQ9H0C8 392 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 RANBP3Q9H6Z4 567 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 GPATCH2LQ9NWQ4 482 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 TUBGCP4Q9UGJ1 667 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 AMDHD2Q9Y303 409 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ALG6Q9Y672 507 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ANKRD11Q6UB99 2663 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 DNAH9Q9NYC9 4486 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 A0A1B0GW55 424 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 NPIPA7E9PJI5 369 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 G3V2L1 256 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 RNASEK-C17orf49H0YIS7 233 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 PPIHO43447 177 aaKnown RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 TSHBP01222 138 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUX4L2P0CJ85 424 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUX4L3P0CJ86 424 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUX4L4P0CJ87 422 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUX4L5P0CJ88 424 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUX4L6P0CJ89 424 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUX4L7P0CJ90 424 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 NPIPA8P0DM63 369 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 GABRG2P18507 467 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 MAKP20794 623 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 CALCRP30988 508 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 RPL13AP40429 203 aaKnown RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 NUP107P57740 925 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 RAB10P61026 200 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 MRPS21P82921 87 aaKnown RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 CYP24A1Q07973 514 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 SNAI3Q3KNW1 292 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ZNF260Q3ZCT1 412 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 C8orf74Q6P047 294 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUX4L9Q6RFH8 374 aaPredicted RBP2.76□□□□□ -1.97
SMC6-208ENST00000481708 C17orf78Q8N4C9 275 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DNAJC22Q8N4W6 341 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ARRDC1Q8N5I2 433 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 TBCKQ8TEA7 893 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ISOC2Q96AB3 205 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 WDR34Q96EX3 536 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 TUBGCP2Q9BSJ2 902 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ATP13A3Q9H7F0 1226 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ANKHQ9HCJ1 492 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 EMC3Q9P0I2 261 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 DUX4Q9UBX2 424 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 ERVW-1Q9UQF0 538 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 FBN2P35556 2912 aa2.76□□□□□ -1.97
SMC6-208ENST00000481708 SLC9A3R1O14745 358 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 TNFSF11O14788 317 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 SLC19A2O60779 497 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 IGLV3-25P01717 112 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 HOXC4P09017 264 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 PAX1P15863 534 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 CD52P31358 61 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 UGT2B10P36537 528 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 C5orf47Q569G3 176 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 DCXRQ7Z4W1 244 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 PLCZ1Q86YW0 608 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 FAM89BQ8N5H3 189 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 TOMM40LQ969M1 308 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 UBE2E3Q969T4 207 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 EPYCQ99645 322 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 VIPAS39Q9H9C1 493 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 IL1RAPQ9NPH3 570 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 ASCL3Q9NQ33 180 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 IGLV5-52A0A0A0MRZ9 124 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 TVP23AA6NH52 213 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 SLC22A20A6NK97 555 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 KRTAP9-7A8MTY7 169 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 NTN3O00634 580 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 AQP9O43315 295 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 EIF4E2O60573 245 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 HLA-HP01893 362 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 ZNF12P17014 697 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 HOXD3P31249 432 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 AVPR1BP47901 424 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 PDLIM4P50479 330 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 RPL14P50914 215 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 ZNF91Q05481 1191 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 C2orf80Q0P641 193 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 FADDQ13158 208 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 MAD2L1BPQ15013 274 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 COQ5Q5HYK3 327 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 FHL5Q5TD97 284 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms