RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 RAB18Q9NP72 206 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 DUX4Q9UBX2 424 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 IL19Q9UHD0 177 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 H3BSA7 217 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 IFNL4K9M1U5 179 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 AIM2O14862 343 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 NPFFO15130 113 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 SURF4O15260 269 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 HPRP00739 348 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 PROCP04070 461 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 INHBAP08476 426 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 SBK3P0C264 359 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 SAA4P35542 130 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 SOAT1P35610 550 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 PSMB10P40306 273 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 ANXA11P50995 505 aaKnown RBP9.66□□□□□ -0.86
USP11-208ENST00000480104 PKNOX1P55347 436 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 PPP1CBP62140 327 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 PLP2Q04941 152 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 GSTA3Q16772 222 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 ATG16L1Q676U5 607 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 UNQ9370/PRO34162Q6UXP9 181 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 CCDC121Q6ZUS5 278 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 TRIM46Q7Z4K8 759 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 UEVLDQ8IX04 471 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 Q8N2B8 174 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 PNKDQ8N490 385 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 RBM15BQ8NDT2 890 aaKnown RBP9.66□□□□□ -0.86
USP11-208ENST00000480104 OR7A2PQ8NGA2 310 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 ABHD4Q8TB40 342 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 OR5P2Q8WZ92 322 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 MRRFQ96E11 262 aaKnown RBP9.66□□□□□ -0.86
USP11-208ENST00000480104 TXNDC15Q96J42 360 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 TRIM31Q9BZY9 425 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 MRPL46Q9H2W6 279 aaKnown RBP9.66□□□□□ -0.86
USP11-208ENST00000480104 TMEM38BQ9NVV0 291 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 CTSZQ9UBR2 303 aa9.66□□□□□ -0.86
USP11-208ENST00000480104 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
USP11-208ENST00000480104 IGHV3-64DA0A0J9YX35 117 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 DUXAA6NLW8 204 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 PEX14O75381 377 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 FSTL3O95633 263 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 LAMP1P11279 417 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 NCF2P19878 526 aaPredicted RBP9.65□□□□□ -0.86
USP11-208ENST00000480104 MATN1P21941 496 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 ACAA2P42765 397 aaKnown RBP9.65□□□□□ -0.86
USP11-208ENST00000480104 CSNK1A1P48729 337 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 NPY4RP50391 375 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 PSG7Q13046 419 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 SLC36A2Q495M3 483 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 SLC16A14Q7RTX9 510 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 CLEC4FQ8N1N0 589 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 DTX3Q8N9I9 347 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 HIPK4Q8NE63 616 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 C19orf18Q8NEA5 215 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 VPS37AQ8NEZ2 397 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 OR4K5Q8NGD3 323 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 SLC7A13Q8TCU3 470 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 STK35Q8TDR2 534 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 MOAP1Q96BY2 351 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 MAGEB18Q96M61 343 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 SSX3Q99909 188 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 MRPL57Q9BQC6 102 aaKnown RBP9.65□□□□□ -0.86
USP11-208ENST00000480104 MYLK2Q9H1R3 596 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 MMADHCQ9H3L0 296 aaPredicted RBP9.65□□□□□ -0.86
USP11-208ENST00000480104 SMURF1Q9HCE7 757 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 LZTFL1Q9NQ48 299 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 POLE3Q9NRF9 147 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 EIF3KQ9UBQ5 218 aaKnown RBP9.65□□□□□ -0.86
USP11-208ENST00000480104 HIF3AQ9Y2N7 669 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 CCL27Q9Y4X3 112 aa9.65□□□□□ -0.86
USP11-208ENST00000480104 LOC102725191A0A1B0GVB3 256 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 A0A1B0GVI7 797 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 MEIOCA2RUB1 952 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 C5orf49A4QMS7 147 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 OR10H3O60404 316 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 FZD7O75084 574 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 ENTPD5O75356 428 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 FARS2O95363 451 aaKnown RBP9.64□□□□□ -0.87
USP11-208ENST00000480104 GUSBP08236 651 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 EEF1B2P24534 225 aaKnown RBP9.64□□□□□ -0.87
USP11-208ENST00000480104 STOMP27105 288 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 DLX1P56177 255 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 HSF2Q03933 536 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 EGR4Q05215 589 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 KLRD1Q13241 179 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 NAB1Q13506 487 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 CDONQ4KMG0 1287 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 WDR88Q6ZMY6 472 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 H1FNTQ75WM6 255 aaPredicted RBP9.64□□□□□ -0.87
USP11-208ENST00000480104 DPPA2Q7Z7J5 298 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 ZER1Q7Z7L7 766 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 MRPL41Q8IXM3 137 aaKnown RBP9.64□□□□□ -0.87
USP11-208ENST00000480104 BEND2Q8NDZ0 799 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 ADAMTS16Q8TE57 1224 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 RORBQ92753 470 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 ROPN1LQ96C74 230 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 MTERF3Q96E29 417 aa9.64□□□□□ -0.87
USP11-208ENST00000480104 PBKQ96KB5 322 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms