RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 C1QTNF12Q5T7M4 302 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 MEPCEQ7L2J0 689 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 GLB1L2Q8IW92 636 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZNF808Q8N4W9 903 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZNF433Q8N7K0 673 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 PROKR2Q8NFJ6 384 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 SLC26A10Q8NG04 563 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 NABP1Q96AH0 204 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZNF837Q96EG3 531 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 FOXB1Q99853 325 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 NELFAQ9H3P2 528 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 RASSF1Q9NS23 344 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 TMEM38BQ9NVV0 291 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 ELOVL5Q9NYP7 299 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 DNAJC27Q9NZQ0 273 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 WARS2Q9UGM6 360 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■■■■■ 28.9
TRAPPC12-218ENST00000479897 COA3Q9Y2R0 106 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 DOPEY1Q5JWR5 2465 aa11.02□□□□□ -0.64
TRAPPC12-218ENST00000479897 ENTPD6O75354 484 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 PLA2G2AP14555 144 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 NPR2P20594 1047 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 TGFBR3Q03167 851 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 HSF2Q03933 536 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 POU4F2Q12837 409 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 CDK5R2Q13319 367 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 MED21Q13503 144 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 APOFQ13790 326 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 ETFDHQ16134 617 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 PCK2Q16822 640 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 LAIR2Q6ISS4 152 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 XKRXQ6PP77 449 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 BCDIN3DQ7Z5W3 292 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 LUZP2Q86TE4 346 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 C17orf78Q8N4C9 275 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 OR1K1Q8NGR3 316 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 CNIH3Q8TBE1 160 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 ZNRF4Q8WWF5 429 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 ITLN2Q8WWU7 325 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 NSMAFQ92636 917 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 TEAD3Q99594 435 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 RBM24Q9BX46 236 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 OR10A4Q9H209 315 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 OR51V1Q9H2C8 321 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 SRA1Q9HD15 236 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 POLE4Q9NR33 117 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 PLCXD1Q9NUJ7 323 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 H2AFY2Q9P0M6 372 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 KCNG2Q9UJ96 466 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 COMMD3-BMI1R4GMX3 469 aa11.02□□□□□ -0.65
TRAPPC12-218ENST00000479897 HCFC1P51610 2035 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 HOXB1P14653 301 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 MSR1P21757 451 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 GSTT1P30711 240 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 FMO3P31513 532 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 PYCR1P32322 319 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 CD79BP40259 229 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 LSM6P62312 80 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 CSNK2BP67870 215 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 ARF1P84077 181 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 ZNF91Q05481 1191 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 KLHL12Q53G59 568 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 SFRP5Q5T4F7 317 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 FAM27BQ5VT28 67 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 OR7E24Q6IFN5 339 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 KRT80Q6KB66 452 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 ANKRD16Q6P6B7 361 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 STAC2Q6ZMT1 411 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 TIGD4Q8IY51 512 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 OR6K6Q8NGW6 343 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 OTULINQ96BN8 352 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 CNBD2Q96M20 576 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 USB1Q9BQ65 265 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 WACQ9BTA9 647 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 HDHD5Q9BXW7 423 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 SIAEQ9HAT2 523 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 MRPS18AQ9NVS2 196 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 MRPL22Q9NWU5 206 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 LRCH1Q9Y2L9 728 aa11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 RPL36Q9Y3U8 105 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-218ENST00000479897 ARPC4-TTLL3A0A0A6YYG9 625 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 A0A1W2PPL8 197 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 CLEC18AA5D8T8 446 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 WIPF3A6NGB9 483 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 ZG16O60844 167 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 FARS2O95363 451 aaKnown RBP11□□□□□ -0.65
TRAPPC12-218ENST00000479897 CLDN14O95500 239 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 TFP02787 698 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 CST2P09228 141 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 CCDC159P0C7I6 412 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 DBTP11182 482 aaKnown RBP11□□□□□ -0.65
TRAPPC12-218ENST00000479897 PIPP12273 146 aaPredicted RBP11□□□□□ -0.65
TRAPPC12-218ENST00000479897 B4GALT1P15291 398 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 CCKARP32238 428 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 GUCA1AP43080 201 aaPredicted RBP11□□□□□ -0.65
TRAPPC12-218ENST00000479897 SLC15A1P46059 708 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 MTNR1AP48039 350 aa11□□□□□ -0.65
TRAPPC12-218ENST00000479897 RPS7P62081 194 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms