RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 CLDN17P56750 224 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 PROK1P58294 105 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 RGNQ15493 299 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 MAPK14Q16539 360 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 GTDC1Q4AE62 458 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 INTS11Q5TA45 600 aaKnown RBP9.42□□□□□ -0.9
CCDC18-208ENST00000479653 C1orf146Q5VVC0 180 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 RGS7BPQ6MZT1 257 aaPredicted RBP9.42□□□□□ -0.9
CCDC18-208ENST00000479653 ZNF620Q6ZNG0 422 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 EPHX4Q8IUS5 362 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 CMIPQ8IY22 773 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 KDM8Q8N371 416 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 C11orf65Q8NCR3 313 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 OR10A6Q8NH74 314 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 MIPOL1Q8TD10 442 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 PPP1R14AQ96A00 147 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 ELMOD3Q96FG2 381 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 SLC35G5Q96KT7 338 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 DCLRE1CQ96SD1 692 aaKnown RBP9.42□□□□□ -0.9
CCDC18-208ENST00000479653 TAPBPLQ9BX59 468 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 TMEM38AQ9H6F2 299 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 GPATCH2Q9NW75 528 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 AURKAIP1Q9NWT8 199 aaPredicted RBP9.42□□□□□ -0.9
CCDC18-208ENST00000479653 B3GNT2Q9NY97 397 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 NKIRAS2Q9NYR9 191 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 SLC7A8Q9UHI5 535 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 MAGEL2Q9UJ55 1249 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 SLC35A3Q9Y2D2 325 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 COL7A1Q02388 2944 aa9.42□□□□□ -0.9
CCDC18-208ENST00000479653 DSPPQ9NZW4 1301 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 TRAV40A0A0B4J280 105 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 PRORSD1PA6NEY8 169 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 SLC43A1O75387 559 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 OPN1MWP04001 364 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 FAM157BP0CG42 384 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 OPN1MW2P0DN77 364 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 OPN1MW3P0DN78 364 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 BMP2P12643 396 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 ZNF14P17017 642 aaPredicted RBP9.41□□□□□ -0.9
CCDC18-208ENST00000479653 MAKP20794 623 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 MATN1P21941 496 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 CD80P33681 288 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 KLF3P57682 345 aaPredicted RBP9.41□□□□□ -0.9
CCDC18-208ENST00000479653 DSTNP60981 165 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 RPS26P62854 115 aaKnown RBP9.41□□□□□ -0.9
CCDC18-208ENST00000479653 FLOT2Q14254 428 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 OXLD1Q5BKU9 147 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 MTX3Q5HYI7 312 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 GCNT6Q5T4J0 391 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 ATAD3BQ5T9A4 648 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 BRD3OSQ6XYD6 125 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 HMGN2P46Q86SG4 172 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 CALHM3Q86XJ0 350 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 RNF130Q86XS8 419 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 OR10S1Q8NGN2 331 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 OR5AK3PQ8NH89 298 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 SYNPRQ8TBG9 265 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 UTP4Q969X6 686 aaKnown RBP9.41□□□□□ -0.9
CCDC18-208ENST00000479653 CCDC124Q96CT7 223 aaKnown RBP9.41□□□□□ -0.9
CCDC18-208ENST00000479653 SLC47A1Q96FL8 570 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 LRGUKQ96M69 825 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 ZNF583Q96ND8 569 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 DIRC2Q96SL1 478 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 OR51B6Q9H340 312 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 EXD2Q9NVH0 621 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 NECAP2Q9NVZ3 263 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 SLCO1C1Q9NYB5 712 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 ACTR3BQ9P1U1 418 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 EGFL7Q9UHF1 273 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 POMPQ9Y244 141 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 SNX13Q9Y5W8 968 aa9.41□□□□□ -0.9
CCDC18-208ENST00000479653 SLC22A23A1A5C7 686 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 CLDN24A6NM45 220 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 ZNF99A8MXY4 864 aaPredicted RBP9.4□□□□□ -0.9
CCDC18-208ENST00000479653 C5orf58C9J3I9 102 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 ANKRD65E5RJM6 399 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 M0R3G1 203 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 AP3D1O14617 1153 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 DHHO43323 396 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 FRS3O43559 492 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 SPRY3O43610 288 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 RAB36O95755 333 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 AK1P00568 194 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 PLATP00750 562 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 IFNA14P01570 189 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 MT-ND5P03915 603 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 LCKP06239 509 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 CXCR1P25024 350 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 SLC6A9P48067 706 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 GIPRP48546 466 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 MAP2K6P52564 334 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 SEC61A1P61619 476 aaKnown RBP9.4□□□□□ -0.9
CCDC18-208ENST00000479653 RAB1AP62820 205 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 GLO1Q04760 184 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 SLC3A1Q07837 685 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 VMACQ2NL98 169 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 FAM205BPQ63HN1 556 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 Q6YL49 198 aa9.4□□□□□ -0.9
CCDC18-208ENST00000479653 C16orf62Q7Z3J2 963 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms