RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RPS6KA3P51812 740 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 CLDN17P56750 224 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 ACTG1P63261 375 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 COX10Q12887 443 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 CR1LQ2VPA4 569 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 CARD17Q5XLA6 110 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 SLC35D2Q76EJ3 337 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 JAZF1Q86VZ6 243 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 ZNF100Q8IYN0 542 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 KBTBD8Q8NFY9 601 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 OR6K3Q8NGY3 331 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 LIPHQ8WWY8 451 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 ZNF775Q96BV0 537 aaPredicted RBP12.67□□□□□ -0.38
USP11-207ENST00000478596 PLEKHA8Q96JA3 519 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 SF3B5Q9BWJ5 86 aaKnown RBP12.67□□□□□ -0.38
USP11-207ENST00000478596 TSSK6Q9BXA6 273 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 PRRG3Q9BZD7 231 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 NGBQ9NPG2 151 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 C8orf4Q9NR00 106 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 GRHPRQ9UBQ7 328 aa12.67□□□□□ -0.38
USP11-207ENST00000478596 ZNF726A6NNF4 738 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 FAM157AC9JC47 383 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 BCL10O95999 233 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 IFNGR1P15260 489 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 AGTR1P30556 359 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 BIDP55957 195 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 CLRN1P58418 232 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 ERVK-25P63136 954 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 SLC17A1Q14916 467 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 SNCBQ16143 134 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 RFX4Q33E94 735 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 ZIK1Q3SY52 487 aaPredicted RBP12.66□□□□□ -0.38
USP11-207ENST00000478596 AGAP6Q5VW22 663 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 AAED1Q7RTV5 226 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 PXKQ7Z7A4 578 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 TUSC5Q8IXB3 177 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 UBE2J2Q8N2K1 259 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 OR2T33Q8NG76 320 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 GCDHQ92947 438 aaPredicted RBP12.66□□□□□ -0.38
USP11-207ENST00000478596 ERMAPQ96PL5 475 aaPredicted RBP12.66□□□□□ -0.38
USP11-207ENST00000478596 CACNG6Q9BXT2 260 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 MED29Q9NX70 200 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 TAS2R5Q9NYW4 299 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 USE1Q9NZ43 259 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 CISD1Q9NZ45 108 aaKnown RBP12.66□□□□□ -0.38
USP11-207ENST00000478596 FLVCR1Q9Y5Y0 555 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 KMT2CQ8NEZ4 4911 aaKnown RBP12.66□□□□□ -0.38
USP11-207ENST00000478596 VWFP04275 2813 aa12.66□□□□□ -0.38
USP11-207ENST00000478596 TEX13CA0A0J9YWL9 993 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 CASQ2O14958 399 aaPredicted RBP12.65□□□□□ -0.38
USP11-207ENST00000478596 SS18L1O75177 396 aaPredicted RBP12.65□□□□□ -0.38
USP11-207ENST00000478596 MRPL33O75394 65 aaKnown RBP12.65□□□□□ -0.38
USP11-207ENST00000478596 ALPLP05186 524 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 YES1P07947 543 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 CD14P08571 375 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 HLA-DOBP13765 273 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 P2RY4P51582 365 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 H3F3AP84243 136 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 CD47Q08722 323 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 ZP4Q12836 540 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 KRR1Q13601 381 aaKnown RBP12.65□□□□□ -0.38
USP11-207ENST00000478596 MIDNQ504T8 468 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 OGFRL1Q5TC84 451 aaPredicted RBP12.65□□□□□ -0.38
USP11-207ENST00000478596 FAM205BPQ63HN1 556 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 KDM4DQ6B0I6 523 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 ALKBH2Q6NS38 261 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 SLC27A4Q6P1M0 643 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 CD300LDQ6UXZ3 194 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 DPY19L2P2Q6ZN68 376 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 BEND4Q6ZU67 534 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 IQCF1Q8N6M8 205 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 PACRGLQ8N7B6 248 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 CLDN22Q8N7P3 220 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 ZNF555Q8NEP9 628 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 STEAP2Q8NFT2 490 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 OR6N1Q8NGY5 312 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 CYGBQ8WWM9 190 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 APH1AQ96BI3 265 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 OTULINQ96BN8 352 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 B3GAT2Q9NPZ5 323 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 SMPD3Q9NY59 655 aaPredicted RBP12.65□□□□□ -0.38
USP11-207ENST00000478596 ADAM18Q9Y3Q7 739 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 IER3IP1Q9Y5U9 82 aa12.65□□□□□ -0.38
USP11-207ENST00000478596 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 A6NIZ1 184 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 RIIAD1A6NNX1 92 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 ZNF716A6NP11 495 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 ZNF724A8MTY0 619 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 TRAF3IP2O43734 574 aaPredicted RBP12.64□□□□□ -0.39
USP11-207ENST00000478596 FZD7O75084 574 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 SLC43A1O75387 559 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 TGFAP01135 160 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 IFNGP01579 166 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 IGHG1P01857 330 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 IGFBP1P08833 259 aaPredicted RBP12.64□□□□□ -0.39
USP11-207ENST00000478596 SLC16A1P53985 500 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms