RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 GDNFP39905 211 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 SRP9P49458 86 aaKnown RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 FBXW4P57775 412 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 CSRP2Q16527 193 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ZNF239Q16600 458 aaKnown RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 MRPL14Q6P1L8 145 aaKnown RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 FCRLAQ7L513 359 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 KRT74Q7RTS7 529 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ZNF227Q86WZ6 799 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 CATSPERDQ86XM0 798 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ZNF676Q8N7Q3 588 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 OR56B4Q8NH76 319 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 NXPE2Q96DL1 559 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 CCDC74BQ96LY2 380 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 AMELYQ99218 206 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 UTP23Q9BRU9 249 aaKnown RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ELOVL3Q9HB03 270 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 CHST11Q9NPF2 352 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 MCUBQ9NWR8 336 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 A0A1B0GVC2 190 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 A6NIN4 97 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 SIGLEC6O43699 453 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 SLC16A7O60669 478 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 KRT33AO76009 404 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ISG15P05161 165 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 FBXO45P0C2W1 286 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 CTLA4P16410 223 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 FKBP2P26885 142 aaKnown RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 PTGDSP41222 190 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 FGD2Q7Z6J4 655 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 OR52N5Q8NH56 324 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 CEP76Q8TAP6 659 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 SYNPRQ8TBG9 265 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 NXT1Q9UKK6 140 aaKnown RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 B3GALT5Q9Y2C3 310 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 DNAH14Q0VDD8 3507 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 LOC102723996A0A087X1L8 192 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 IGHV3-20A0A0C4DH32 117 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 TRBV11-1A0A0K0K1C0 115 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 FAM47E-STBD1D6RA91 191 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 ZNF354AO60765 605 aaPredicted RBP10.96□□□□□ -0.65
PTPRF-212ENST00000477970 PRAF2O60831 178 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 ZFAND5O76080 213 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 MECP2P51608 486 aaKnown RBP10.96□□□□□ -0.65
PTPRF-212ENST00000477970 MEP1BQ16820 701 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 FAM166AQ6J272 317 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 NHLRC1Q6VVB1 395 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 ZFP3Q96NJ6 502 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 GALNT9Q9HCQ5 603 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 FBXL3Q9UKT7 428 aa10.96□□□□□ -0.65
PTPRF-212ENST00000477970 ANKRD20A5PA0PJZ0 165 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 ACOT7O00154 380 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 ADRB1P08588 477 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 SNTB2Q13425 540 aaKnown RBP10.96□□□□□ -0.66
PTPRF-212ENST00000477970 IL11RAQ14626 422 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 POMZP3Q6PJE2 187 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 LINGO2Q7L985 606 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 PPP1R3BQ86XI6 285 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 SLC26A10Q8NG04 563 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 SLC22A8Q8TCC7 542 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 FCAMRQ8WWV6 532 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 TMEM106AQ96A25 262 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 CACNG6Q9BXT2 260 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 OR11A1Q9GZK7 315 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 NUDT15Q9NV35 164 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 PAQR5Q9NXK6 330 aaPredicted RBP10.96□□□□□ -0.66
PTPRF-212ENST00000477970 LIPT2A6NK58 231 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 ANXA2P2A6NMY6 339 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 ANXA2P07355 339 aaKnown RBP10.96□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF806P0C7X5 589 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 STOMP27105 288 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 DHPSP49366 369 aaPredicted RBP10.96□□□□□ -0.66
PTPRF-212ENST00000477970 RIDAP52758 137 aaKnown RBP10.96□□□□□ -0.66
PTPRF-212ENST00000477970 TRA2AQ13595 282 aaKnown RBP eCLIP10.96□□□□□ -0.66
PTPRF-212ENST00000477970 GSG1Q2KHT4 349 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF433Q8N7K0 673 aaPredicted RBP10.96□□□□□ -0.66
PTPRF-212ENST00000477970 GRPEL2Q8TAA5 225 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 HYLS1Q96M11 299 aa10.96□□□□□ -0.66
PTPRF-212ENST00000477970 TRAV8-7A0A075B6U6 113 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 A0A087WV48 116 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 XRCC3O43542 346 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 GLSO94925 669 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-212ENST00000477970 IGFBP3P17936 291 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-212ENST00000477970 GIFP27352 417 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 DCTDP32321 178 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 GPR85P60893 370 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 ADAM8P78325 824 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 SSBP1Q04837 148 aaKnown RBP10.95□□□□□ -0.66
PTPRF-212ENST00000477970 PLPPR5Q32ZL2 321 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 SHISA6Q6ZSJ9 500 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 ESPNLQ6ZVH7 1005 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 DTX3Q8N9I9 347 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 MED28Q9H204 178 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 MYOTQ9UBF9 498 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 R4GMQ9 66 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 GMFGO60234 142 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 PLGP00747 810 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-212ENST00000477970 H2AFB2P0C5Z0 115 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 HLA-BQ31612 363 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms