RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 GPAT3Q53EU6 434 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 WDR25Q64LD2 544 aaPredicted RBP6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 ATG16L1Q676U5 607 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 TNFAIP8L2Q6P589 184 aaPredicted RBP6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 LRFN4Q6PJG9 635 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 C1orf122Q6ZSJ8 110 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 ZCCHC23Q6ZST2 131 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 DPPA2Q7Z7J5 298 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 THNSL2Q86YJ6 484 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 UEVLDQ8IX04 471 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF440Q8IYI8 595 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 CLECL1Q8IZS7 167 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 MIER2Q8N344 545 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 KRTCAP2Q8N6L1 136 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 KLHDC1Q8N7A1 406 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 ANKFN1Q8N957 763 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 OR4F17Q8NGA8 305 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 OR6N1Q8NGY5 312 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 MUC7Q8TAX7 377 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC25A40Q8TBP6 338 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 TAAR8Q969N4 342 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 NEIL1Q96FI4 390 aaPredicted RBP6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC41A3Q96GZ6 507 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 TRNT1Q96Q11 434 aaKnown RBP6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 OR4F4Q96R69 305 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 PAFAH2Q99487 392 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 TMEM246Q9BRR3 403 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 DUSP26Q9BV47 211 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 SPATA9Q9BWV2 254 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC19A3Q9BZV2 496 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 LRMDAQ9H2I8 198 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 GCM1Q9NP62 436 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 TMEM38BQ9NVV0 291 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 KIF17Q9P2E2 1029 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 CLN8Q9UBY8 286 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 DNAJC15Q9Y5T4 150 aa6.04□□□□□ -1.44
SPTLC1-205ENST00000477888 IQCMA0A1B0GVH7 501 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ANKRD61A6NGH8 418 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF726A6NNF4 738 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 TMEM114B3SHH9 223 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 G3V2L1 256 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 HMGN4O00479 90 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 PHYHO14832 338 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ENSAO43768 121 aaKnown RBP6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 OR2T1O43869 369 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 LIPFP07098 398 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 DBIP07108 87 aaKnown RBP6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 MMP7P09237 267 aaPredicted RBP6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 NEFHP12036 1026 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 PTMSP20962 102 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 PRPS1L1P21108 318 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 GTF2E2P29084 291 aaKnown RBP6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 EPHA3P29320 983 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 PITPNBP48739 271 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 EGFEM1PQ0D2K5 195 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 PSG7Q13046 419 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 GNA13Q14344 377 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 SYPL1Q16563 259 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 SMU1Q2TAY7 513 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF404Q494X3 552 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC36A2Q495M3 483 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 GALNTL6Q49A17 601 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ZMAT1Q5H9K5 638 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 MTX3Q5HYI7 312 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 FAM69AQ5T7M9 428 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 TMEM53Q6P2H8 277 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 TIFABQ6ZNK6 161 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 Q6ZR03 302 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 NET1Q7Z628 596 aaPredicted RBP6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 LCA5Q86VQ0 697 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 NDUFA11Q86Y39 141 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 PTOV1Q86YD1 416 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 PAPD5Q8NDF8 572 aaKnown RBP6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ADPRHL1Q8NDY3 354 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 OR4K5Q8NGD3 323 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 OR8B3Q8NGG8 313 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ITLN1Q8WWA0 313 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 LHX4Q969G2 390 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 TMEM54Q969K7 222 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 POM121L2Q96KW2 1035 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 WDFY2Q96P53 400 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 OR8B2Q96RD0 313 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 RHOXF2Q9BQY4 288 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 DPY30Q9C005 99 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 SIRPDQ9H106 197 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 PPA2Q9H2U2 334 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 CENPHQ9H3R5 247 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 CNTD2Q9H8S5 307 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 RNF121Q9H920 327 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 GLTPQ9NZD2 209 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNRD1Q9P1U0 126 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 IL19Q9UHD0 177 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 RPUSD1Q9UJJ7 312 aaKnown RBP6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF180Q9UJW8 692 aa6.03□□□□□ -1.44
SPTLC1-205ENST00000477888 LOC100509620A0A075B734 347 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 A0A087WUJ7 227 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 H3BSA7 217 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 AZIN1O14977 448 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 ENTPD5O75356 428 aa6.02□□□□□ -1.45
SPTLC1-205ENST00000477888 FARS2O95363 451 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms