RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	REEP5	Q00765	189 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	SHH	Q15465	462 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TEAD2	Q15562	447 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	RAB30	Q15771	203 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZBTB6	Q15916	424 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TMEM241	Q24JQ0	296 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	CPTP	Q5TA50	214 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR2G6	Q5TZ20	316 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZDHHC20	Q5W0Z9	365 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	REEP3	Q6NUK4	255 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	NOXRED1	Q6NXP6	359 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF529	Q6P280	563 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	PGBD2	Q6P3X8	592 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	CLEC9A	Q6UXN8	241 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TMIGD1	Q6UXZ0	262 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	B3GLCT	Q6Y288	498 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520		Q6ZRM9	215 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ADCK2	Q7Z695	626 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACOT1	Q86TX2	421 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	PPP1R3B	Q86XI6	285 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF573	Q86YE8	665 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ARHGAP12	Q8IWW6	846 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TDH	Q8IZJ6	230 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	UMODL1-AS1	Q8N2C9	162 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	GALNT16	Q8N428	558 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	KRTCAP2	Q8N6L1	136 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	HORMAD2	Q8N7B1	307 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR52B6	Q8NGF0	335 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR5AP2	Q8NGF4	316 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR10D4P	Q8NGN7	298 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR5M8	Q8NGP6	311 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR5M1	Q8NGP8	315 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR51Q1	Q8NH59	317 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR4C6	Q8NH72	309 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR5AK2	Q8NH90	309 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	LYPD6B	Q8NI32	183 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF671	Q8TAW3	534 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	CD200R1	Q8TD46	325 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ROBO4	Q8WZ75	1007 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	SMARCD2	Q92925	531 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	FBXO32	Q969P5	355 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TM4SF18	Q96CE8	201 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	LINGO1	Q96FE5	620 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	PIK3IP1	Q96FE7	263 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ADGRG7	Q96K78	797 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	CLCC1	Q96S66	551 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF607	Q96SK3	696 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	COPS8	Q99627	209 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	GPR21	Q99679	349 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	MICU1	Q9BPX6	476 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	COMMD4	Q9H0A8	199 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR2AG1	Q9H205	316 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	NELFA	Q9H3P2	528 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	EPHX3	Q9H6B9	360 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACKR4	Q9NPB9	350 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	SLC17A5	Q9NRA2	495 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	MRPL17	Q9NRX2	175 aa	Known RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	PIGV	Q9NUD9	493 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TMEM184C	Q9NVA4	438 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	DOK5	Q9P104	306 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	MTFP1	Q9UDX5	166 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	APOBEC3B	Q9UH17	382 aa	Known RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	RCE1	Q9Y256	329 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ADAM18	Q9Y3Q7	739 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	MMACHC	Q9Y4U1	282 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	MYO7A	Q13402	2215 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TRAV14DV4	A0A0A6YYC5	116 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520		A0A0B4J2A0	478 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520		A0A0G2JK05	382 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	FAM90A27P	A6NNH2	459 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	CDRT15L2	A8MXV6	281 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	PPP5D1	E7EU14	171 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	ANHX	E9PGG2	379 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	NPIPA2	E9PIF3	369 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520		K7EP13	123 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	SYT5	O00445	386 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	PTGES	O14684	152 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	SCAMP2	O15127	329 aa	Known RBP	4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	SLC16A5	O15375	505 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	GPR39	O43194	453 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	CLDN11	O75508	207 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	B3GAT3	O94766	335 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	AHSA1	O95433	338 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	PRAMEF12	O95522	483 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	CXCL14	O95715	111 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	RLN1	P04808	185 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	C8G	P07360	202 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	GALT	P07902	379 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	FCGR3A	P08637	254 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	ANKRD34C	P0C6C1	535 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR5H8	P0DN80	308 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF7	P17097	686 aa	Predicted RBP	4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACHE	P22303	614 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	SLC2A5	P22732	501 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	ELAVL4	P26378	380 aa	Known RBP	4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	ITPKB	P27987	946 aa		4.26	□□□□□ -1.73
PTCD3-212	ENST00000477520	AVPR2	P30518	371 aa		4.26	□□□□□ -1.73

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