RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TBX6O95947 436 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 RECKO95980 971 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TACSTD2P09758 323 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ZGLP1P0C6A0 271 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 GP1BBP13224 206 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SPI1P17947 270 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 RAB6AP20340 208 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 C5AR1P21730 350 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 BLOC1S1P78537 153 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 IL13RA1P78552 427 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 MC2RQ01718 297 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TNK1Q13470 666 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CBFBQ13951 182 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ELOAQ14241 798 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 EBPQ15125 230 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SWI5Q1ZZU3 235 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PRAMEF8Q5VWM4 474 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PRAMEF7Q5VXH5 474 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 C12orf73Q69YU5 71 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SLC29A4Q7RTT9 530 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 GPALPP1Q8IXQ4 340 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 KLHDC8BQ8IXV7 354 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 C17orf78Q8N4C9 275 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 STEAP2Q8NFT2 490 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 OR4D6Q8NGJ1 314 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ZFAND1Q8TCF1 268 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TMED6Q8WW62 240 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PIGTQ969N2 578 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 GAL3ST3Q96A11 431 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 FGGYQ96C11 551 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SERINC2Q96SA4 455 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 INTS14Q96SY0 518 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TMPRSS13Q9BYE2 586 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 AICDAQ9GZX7 198 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ARRDC1-AS1Q9H2J1 176 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TRAV8-7A0A075B6U6 113 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 A0A0A6YYD5 115 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 FAM230AA0A1W2PPH8 454 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 TXNL1O43396 289 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 SLC43A1O75387 559 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 SRFP11831 508 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 GNB3P16520 340 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 TUBG1P23258 451 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 FPR3P25089 353 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PEBP1P30086 187 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 CDKN2AP42771 156 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 CAPZA1P52907 286 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PCBP4P57723 403 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 OR1D5P58170 312 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM35AQ53FP2 167 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 GPHA2Q96T91 129 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF436Q9C0F3 470 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 OR10A5Q9H207 317 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PELI2Q9HAT8 420 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 HRASLSQ9HDD0 168 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 LANCL2Q9NS86 450 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 SLCO1C1Q9NYB5 712 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 KCNE5Q9UJ90 142 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 FAM96BQ9Y3D0 163 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 TANC1Q9C0D5 1861 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 LMX1BO60663 402 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 THY1P04216 161 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PATE4P0C8F1 98 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 EPXP11678 715 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 NID1P14543 1247 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ABOP16442 354 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 EPHA1P21709 976 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 HNRNPA2B1P22626 353 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 NFYAP23511 347 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PKLRP30613 574 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 OPRM1P35372 400 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 NANOS3P60323 173 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 TLE3Q04726 772 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 CDC20Q12834 499 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 AIMP2Q13155 320 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 CD226Q15762 336 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 RAB11BQ15907 218 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 OCLNQ16625 522 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ALG11Q2TAA5 492 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PRTGQ2VWP7 1150 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 RAET1LQ5VY80 246 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 FAM199XQ6PEV8 388 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 GDPGP1Q6ZNW5 385 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 RASGRP3Q8IV61 690 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF611Q8N823 705 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 KIAA1958Q8N8K9 716 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ELSPBP1Q96BH3 223 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 SGCZQ96LD1 299 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 AMELYQ99218 206 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 COL25A1Q9BXS0 654 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 POFUT1Q9H488 388 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 SLC2A4RGQ9NR83 387 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 SDHAF2Q9NX18 166 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 NTMQ9P121 344 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 KCNN3Q9UGI6 736 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ZMIZ1Q9ULJ6 1067 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 KLHDC2Q9Y2U9 406 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 KIF26AQ9ULI4 1882 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF736B4DX44 427 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms