RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 ZNF32P17041 273 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 NPR2P20594 1047 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 NR4A1P22736 598 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 PAX7P23759 505 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 APEX1P27695 318 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 LAP3P28838 519 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 ZNF133P52736 654 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 ERVS71-1P61550 626 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 TAF11Q15544 211 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 TMEM53Q6P2H8 277 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 TRPM8Q7Z2W7 1104 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 FAM122BQ7Z309 247 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 BIVMQ86UB2 503 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 LRP11Q86VZ4 500 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 DHFR2Q86XF0 187 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 SLC30A7Q8NEW0 376 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 NUP37Q8NFH4 326 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 ZNF570Q96NI8 536 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 SYT3Q9BQG1 590 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 ALG12Q9BV10 488 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 REG4Q9BYZ8 158 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 EMC7Q9NPA0 242 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 IL1RAPQ9NPH3 570 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 VNN3Q9NY84 501 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 PMF1-BGLAPU3KQ54 211 aa11.36□□□□□ -0.59
NIPAL3-206ENST00000475663 HEATR1Q9H583 2144 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 SLC22A23A1A5C7 686 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 A6NIZ1 184 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 CENPBD1B2RD01 187 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 H7C417 338 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 MGRN1O60291 552 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 MPZL1O95297 269 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 GPANK1O95872 356 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 IGFBP1P08833 259 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 MMP7P09237 267 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 CCNOP22674 350 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 RAP1BP61224 184 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 SNRPD2P62316 118 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 RAP1AP62834 184 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 MRPS34P82930 218 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 HSF2Q03933 536 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 KRR1Q13601 381 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 TRIM25Q14258 630 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 MAD2L1BPQ15013 274 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 CARTPTQ16568 116 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 ALKBH6Q3KRA9 238 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 SLC36A2Q495M3 483 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 PABPC1L2AQ5JQF8 200 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 THEM4Q5T1C6 240 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 UGT2A3Q6UWM9 527 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 PTCHD4Q6ZW05 846 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 ICA1LQ8NDH6 482 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 CPEB3Q8NE35 698 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 OR9Q2Q8NGE9 314 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 FANK1Q8TC84 345 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 MRPL37Q9BZE1 423 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 TPK1Q9H3S4 243 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 SIAEQ9HAT2 523 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 CDH20Q9HBT6 801 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 MOV10Q9HCE1 1003 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 CCNB1IP1Q9NPC3 277 aa11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 MYEF2Q9P2K5 600 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 STX18Q9P2W9 335 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-206ENST00000475663 PRSS37A4D1T9 235 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 B9A039 149 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 TNFRSF11BO00300 401 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 XKRYO14609 159 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 CTLA4P16410 223 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 CDKN2AP42771 156 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 ALDH3B1P43353 468 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 SMIM11AP58511 58 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 PSG4Q00888 419 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 GALK2Q01415 458 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 ENDOGQ14249 297 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 ANKDD1AQ495B1 522 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 SPATS1Q496A3 300 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 LCN8Q6JVE9 175 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 PGBD2Q6P3X8 592 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 SMARCD3Q6STE5 483 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 DNM1P46Q6ZS02 220 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 IL17RDQ8NFM7 739 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 SAMD8Q96LT4 415 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 TSSK2Q96PF2 358 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 ERMAPQ96PL5 475 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 DOK1Q99704 481 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 SYT4Q9H2B2 425 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 OR52D1Q9H346 318 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 PLK3Q9H4B4 646 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 ZNF442Q9H7R0 627 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 SMURF2Q9HAU4 748 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 BARX1Q9HBU1 254 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 NRIP3Q9NQ35 241 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 TMCC3Q9ULS5 477 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 CMAHPQ9Y471 501 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 LYVE1Q9Y5Y7 322 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 U3KQV3 271 aa11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 SETD2Q9BYW2 2564 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-206ENST00000475663 IQCMA0A1B0GVH7 501 aa11.33□□□□□ -0.6
NIPAL3-206ENST00000475663 SLC16A7O60669 478 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms