RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SPATA24Q86W54 205 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 OR13C9Q8NGT0 318 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 UCN3Q969E3 161 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 XPO6Q96QU8 1125 aaKnown RBP3.89□□□□□ -1.79
SMC5-203ENST00000475540 KCNS3Q9BQ31 491 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 TMEM165Q9HC07 324 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 ADAP2Q9NPF8 381 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 B3GNT2Q9NY97 397 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 IFNKQ9P0W0 207 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 UGT2A1Q9Y4X1 527 aa3.89□□□□□ -1.79
SMC5-203ENST00000475540 IGKV2D-24A0A075B6R9 120 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 IGKV6-21A0A0C4DH24 114 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 GSTTP1A0A1W2PQM5 241 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 TMEM120BA0PK00 339 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 A6NDX4 124 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 VSTM2BA6NLU5 285 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 FAM166BA8MTA8 275 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 M0R3G1 203 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 ICOSLGO75144 302 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 CCNB2O95067 398 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 C2P06681 752 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 DCKP27707 260 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 PTGDSP41222 190 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 SLC1A2P43004 574 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 ARRB1P49407 418 aaPredicted RBP3.88□□□□□ -1.79
SMC5-203ENST00000475540 TMED10P49755 219 aaKnown RBP3.88□□□□□ -1.79
SMC5-203ENST00000475540 CCNHP51946 323 aaPredicted RBP3.88□□□□□ -1.79
SMC5-203ENST00000475540 CDH17Q12864 832 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 SELENBP1Q13228 472 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 SLAQ13239 276 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 ZNF691Q5VV52 312 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 GDPD3Q7L5L3 318 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 MRPL21Q7Z2W9 205 aaKnown RBP3.88□□□□□ -1.79
SMC5-203ENST00000475540 IQCKQ8N0W5 287 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 JAGN1Q8N5M9 183 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 Q8N9W7 124 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 PYROXD1Q8WU10 500 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 ASZ1Q8WWH4 475 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 OXGR1Q96P68 337 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 TBX15Q96SF7 602 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 SLC29A1Q99808 456 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 OR51M1Q9H341 326 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 SAMSN1Q9NSI8 373 aaKnown RBP3.88□□□□□ -1.79
SMC5-203ENST00000475540 UXTQ9UBK9 157 aaPredicted RBP3.88□□□□□ -1.79
SMC5-203ENST00000475540 FLVCR2Q9UPI3 526 aa3.88□□□□□ -1.79
SMC5-203ENST00000475540 A0A1W2PRD5 423 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 GJE1A6NN92 205 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 GFYI3L273 518 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 GOSR2O14653 212 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 KDELR3O43731 214 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 E2F6O75461 281 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 TSPAN13O95857 204 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 HOXB8P17481 243 aaPredicted RBP3.87□□□□□ -1.79
SMC5-203ENST00000475540 CD82P27701 267 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 RORAP35398 523 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 FBXW4P57775 412 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 ERVK-25P63136 954 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 RCAN2Q14206 197 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 SAMD4BQ5PRF9 694 aaKnown RBP3.87□□□□□ -1.79
SMC5-203ENST00000475540 ERICH5Q6P6B1 374 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 DEGS2Q6QHC5 323 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 CMTM8Q8IZV2 173 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 LIX1Q8N485 282 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 MS4A15Q8N5U1 240 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 TTC29Q8NA56 475 aaPredicted RBP3.87□□□□□ -1.79
SMC5-203ENST00000475540 GATSQ8NAP1 163 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 INO80EQ8NBZ0 244 aaPredicted RBP3.87□□□□□ -1.79
SMC5-203ENST00000475540 MDS2Q8NDY4 140 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 NDNFQ8TB73 568 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 ZNF596Q8TC21 504 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 CD300LFQ8TDQ1 290 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 NAT6Q93015 286 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 C9orf72Q96LT7 481 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 CSPG4P5Q96PW8 444 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 TM6SF2Q9BZW4 377 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 MYEF2Q9P2K5 600 aaKnown RBP3.87□□□□□ -1.79
SMC5-203ENST00000475540 PRG3Q9Y2Y8 225 aaPredicted RBP3.87□□□□□ -1.79
SMC5-203ENST00000475540 SAR1BQ9Y6B6 198 aa3.87□□□□□ -1.79
SMC5-203ENST00000475540 AIREO43918 545 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 FGF1P05230 155 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 CCNOP22674 350 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 SPAM1P38567 509 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 PSMD4P55036 377 aaKnown RBP3.86□□□□□ -1.79
SMC5-203ENST00000475540 MAP3K7CLP57077 242 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 PRPS1P60891 318 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 HERVK_113P61574 105 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 UNC119Q13432 240 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 CYTH1Q15438 398 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 USF2Q15853 346 aaPredicted RBP3.86□□□□□ -1.79
SMC5-203ENST00000475540 PPM1LQ5SGD2 360 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 PDPK2PQ6A1A2 396 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 ULK3Q6PHR2 472 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 ZNF836Q6ZNA1 936 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 Q6ZSR3 168 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 APRG1Q8IVJ8 170 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 H1FOOQ8IZA3 346 aaPredicted RBP3.86□□□□□ -1.79
SMC5-203ENST00000475540 ST13P4Q8IZP2 240 aaPredicted RBP3.86□□□□□ -1.79
SMC5-203ENST00000475540 OR51L1Q8NGJ5 315 aa3.86□□□□□ -1.79
SMC5-203ENST00000475540 OR56B4Q8NH76 319 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms