RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 HAX1O00165 279 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 ARHGEF9O43307 516 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 DHHO43323 396 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 AKAP8O43823 692 aaKnown RBP6.1□□□□□ -1.43
LIMD1-204ENST00000474665 IDH3BO43837 385 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 BAG2O95816 211 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 GPANK1O95872 356 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 PSKH1P11801 424 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 B4GALT1P15291 398 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 CDH2P19022 906 aaPredicted RBP6.1□□□□□ -1.43
LIMD1-204ENST00000474665 POU1F1P28069 291 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 PEX2P28328 305 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 CDAP32320 146 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 CRISP1P54107 249 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 CLRN1P58418 232 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 RAP1BP61224 184 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 RAP1AP62834 184 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 TUBA1BP68363 451 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 TUBA4AP68366 448 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 DAG1Q14118 895 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 PGGHGQ32M88 737 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 TBRG1Q3YBR2 411 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 FAM205BPQ63HN1 556 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 LPCAT4Q643R3 524 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 RPL13AP3Q6NVV1 102 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 FOXL2NBQ6ZUU3 175 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 TUBA1AQ71U36 451 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 ADCK1Q86TW2 530 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 MYPOPQ86VE0 399 aaPredicted RBP6.1□□□□□ -1.43
LIMD1-204ENST00000474665 SKA3Q8IX90 412 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 C10orf67Q8IYJ2 551 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 OR6V1Q8N148 313 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 C1orf162Q8NEQ5 155 aaPredicted RBP6.1□□□□□ -1.43
LIMD1-204ENST00000474665 SDR9C7Q8NEX9 313 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 NSMAFQ92636 917 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 PTP4A1Q93096 173 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF75AQ96N20 296 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 FOXN4Q96NZ1 517 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 MBOAT4Q96T53 435 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 HDHD5Q9BXW7 423 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 GABARAPL3Q9BY60 117 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 ULBP2Q9BZM5 246 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 NUAK2Q9H093 628 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 FN3KQ9H479 309 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 SLC25A19Q9HC21 320 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 SLC17A5Q9NRA2 495 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 TBC1D23Q9NUY8 699 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 TMEM38BQ9NVV0 291 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 B3GNT2Q9NY97 397 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 STX18Q9P2W9 335 aaKnown RBP6.1□□□□□ -1.43
LIMD1-204ENST00000474665 GRHPRQ9UBQ7 328 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 ST6GALNAC2Q9UJ37 374 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 PLEKHA6Q9Y2H5 1048 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 ZANQ9Y493 2812 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 MXRA5Q9NR99 2828 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SH3D21A4FU49 640 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 DPRXA6NFQ7 191 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ZAR1LA6NP61 321 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 H3BN98 237 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 CASQ2O14958 399 aaPredicted RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SURF4O15260 269 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 RRP9O43818 475 aaKnown RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 AHCYL1O43865 530 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 PRKYO43930 277 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 MGRN1O60291 552 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 KRT33AO76009 404 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 MPZL1O95297 269 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SNAP29O95721 258 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 PATE4P0C8F1 98 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 GAAP10253 952 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 CLUP10909 449 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 EPXP11678 715 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 IL32P24001 234 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 IGFBP5P24593 272 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 GRK5P34947 590 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 KIR2DL3P43628 341 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ALDH3A2P51648 485 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 RPS6KA3P51812 740 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ARHGDIAP52565 204 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SH3BGRP55822 239 aaPredicted RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ESRRGP62508 458 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 MRPS34P82930 218 aaKnown RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 CD47Q08722 323 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 NPRL3Q12980 569 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 CRMP1Q14194 572 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ENDOGQ14249 297 aaKnown RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 DAZAP2Q15038 168 aaPredicted RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 PTGES3Q15185 160 aaKnown RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 STK11Q15831 433 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 TIMM23BQ5SRD1 257 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 THEM4Q5T1C6 240 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 OGFRL1Q5TC84 451 aaPredicted RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 LINC01590Q5TEZ4 76 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SLX4IPQ5VYV7 408 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 C12orf73Q69YU5 71 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SLC27A4Q6P1M0 643 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 LEG1Q6P5S2 330 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ANKRD16Q6P6B7 361 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 KLHL24Q6TFL4 600 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms