RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 EXOSC6Q5RKV6 272 aaKnown RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 FHL5Q5TD97 284 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 ERN2Q76MJ5 926 aaKnown RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF627Q7L945 461 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 SLC29A4Q7RTT9 530 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 SLC16A9Q7RTY1 509 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 C15orf54Q8N8G6 183 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 OR2L8Q8NGY9 312 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 HIST1H2BAQ96A08 127 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 TCEAL7Q9BRU2 100 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 NAA11Q9BSU3 229 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 COMMD4Q9H0A8 199 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 CYTL1Q9NRR1 136 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 CSAG2Q9Y5P2 127 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 SLC22A7Q9Y694 548 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 LRRC72A6NJI9 287 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 ARPC3O15145 178 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 LILRB3O75022 631 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 CXCL10P02778 98 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 CD14P08571 375 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 PBX2P40425 430 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 CDKN2AP42771 156 aaKnown RBP16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 COL19A1Q14993 1142 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 ACER2Q5QJU3 275 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 LINC00114Q6XXX2 140 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 SLC25A42Q86VD7 318 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 MITD1Q8WV92 249 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 DCUN1D4Q92564 292 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 LAT2Q9GZY6 243 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 ZMAT3Q9HA38 289 aaKnown RBP16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 PRMT8Q9NR22 394 aaPredicted RBP16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 LPAR3Q9UBY5 353 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 PCDHGA1Q9Y5H4 931 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 LOC100509620A0A075B734 347 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 TTLL8A6PVC2 850 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 SLC17A2O00624 439 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 INHAP05111 366 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 PCCBP05166 539 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 CPMP14384 443 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 NKPD1Q17RQ9 610 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 ANKRD33Q7Z3H0 272 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 PRSS35Q8N3Z0 413 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 MFSD9Q8NBP5 474 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 NUBPLQ8TB37 319 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF285Q96NJ3 590 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 PAPOLGQ9BWT3 736 aaKnown RBP16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 SEC61A2Q9H9S3 476 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 SLC17A5Q9NRA2 495 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 METTL1Q9UBP6 276 aaKnown RBP16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 PCOLCE2Q9UKZ9 415 aa16.85■□□□□ 0.29
ECHDC1-214ENST00000474289 ALPK2Q86TB3 2170 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 C9orf170A2RU37 121 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 P2RX6O15547 441 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 TXNL1O43396 289 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 DNAJB6O75190 326 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF432O94892 652 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 CRHP06850 196 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 PRF1P14222 555 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 PEBP1P30086 187 aaKnown RBP16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 CAV2P51636 162 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 CDK3Q00526 305 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 ELOCQ15369 112 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 AKIRIN2Q53H80 203 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 KIRREL2Q6UWL6 708 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 DRAM2Q6UX65 266 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 CDRT4Q8N9R6 151 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 RRNAD1Q96FB5 475 aaKnown RBP16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 PHB2Q99623 299 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 TRIM2Q9C040 744 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 CHMP1AQ9HD42 196 aaPredicted RBP16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 TMEM74BQ9NUR3 256 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 DNAJB12Q9NXW2 375 aaKnown RBP16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 TMEM212A6NML5 194 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 IL2RAP01589 272 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 AGAP20933 346 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 PSMB6P28072 239 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 GABRA3P34903 492 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 IL13RA1P78552 427 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 SP3Q02447 781 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 DMWDQ09019 674 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 PNLIPRP3Q17RR3 467 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 RNF212Q495C1 297 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 CD163Q86VB7 1156 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 SAMD14Q8IZD0 417 aaPredicted RBP16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 PLPP7Q8NBV4 271 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 OR4S1Q8NGB4 309 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 OR4E2Q8NGC2 313 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 OR52E1Q8NGJ3 308 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 NUDCD2Q8WVJ2 157 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 MKKSQ9NPJ1 570 aaPredicted RBP16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 KLK13Q9UKR3 277 aa16.84■□□□□ 0.29
ECHDC1-214ENST00000474289 MPDZO75970 2070 aa16.83■□□□□ 0.29
ECHDC1-214ENST00000474289 C5orf42Q9H799 3197 aa16.83■□□□□ 0.29
ECHDC1-214ENST00000474289 ELOA3DA6NLF2 546 aaPredicted RBP16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 CPT2P23786 658 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 AKR1C3P42330 323 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 RPS27P42677 84 aaKnown RBP16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 PPICP45877 212 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 EXOSC7Q15024 291 aaKnown RBP16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 ELOA3BQ3SY89 546 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms