RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ZNF41P51814 821 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 RPL27P61353 136 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 IL13RA1P78552 427 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF117Q03924 483 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 RPL18Q07020 188 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 MAB21L1Q13394 359 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ALKBH1Q13686 389 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SGCBQ16585 318 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NTRK2Q16620 822 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 CLPPQ16740 277 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 TATDN3Q17R31 274 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 Q499Y3 187 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF362Q5T0B9 420 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 C1orf189Q5VU69 101 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 C1orf140Q5VVS0 124 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 RHBDD2Q6NTF9 364 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 TMEM71Q6P5X7 295 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ASB18Q6ZVZ8 466 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NOXA1Q86UR1 476 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 UBALD2Q8IYN6 164 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 PRSS58Q8IYP2 241 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 PRR22Q8IZ63 422 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 TCTE3Q8IZS6 198 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 GHDCQ8N2G8 530 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF433Q8N7K0 673 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 OR4M2Q8NGB6 313 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 OR51L1Q8NGJ5 315 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 OR6F1Q8NGZ6 308 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC22A8Q8TCC7 542 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 Q8TCH9 128 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 GPR148Q8TDV2 347 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 TSEN15Q8WW01 171 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 FCAMRQ8WWV6 532 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ST8SIA1Q92185 356 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ADIPOR1Q96A54 375 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC25A36Q96CQ1 311 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 DDIT4LQ96D03 193 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 WWC2-AS2Q96NR7 200 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NEDD4LQ96PU5 975 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 OR14A2Q96R54 314 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ELF4Q99607 663 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 LPAR4Q99677 370 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 CTRCQ99895 268 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 MED28Q9H204 178 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NIPAL2Q9H841 368 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 UCKL1Q9NWZ5 548 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 MRPL39Q9NYK5 338 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 TAS2R10Q9NYW0 307 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 PTTG3PQ9NZH4 202 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SEMA5BQ9P283 1151 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NLKQ9UBE8 527 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NXT1Q9UKK6 140 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NPIPA1Q9UND3 350 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ING4Q9UNL4 249 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 MRPS7Q9Y2R9 242 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 TMED7Q9Y3B3 224 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 FKBP7Q9Y680 259 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SIRT4Q9Y6E7 314 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 V9GY05 133 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SNRNP200O75643 2136 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 GOLGA4Q13439 2230 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 CACNA1IQ9P0X4 2223 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 BDP1A6H8Y1 2624 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TMEM72A0PK05 275 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 CPED1A4D0V7 1026 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ANKUB1A6NFN9 424 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 VSTM2BA6NLU5 285 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 IFITM5A6NNB3 132 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 PLA2G10O15496 165 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 GSTZ1O43708 216 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 SSX4O60224 188 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TSPAN2O60636 221 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 PRAF2O60831 178 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ALOX12BO75342 701 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 KHDRBS3O75525 346 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 SCRG1O75711 98 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 SC5DO75845 299 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 KRT33AO76009 404 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 RPP14O95059 124 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TFP02787 698 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 BGLAPP02818 100 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 IL9P15248 144 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 FOLR1P15328 257 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF823P16415 610 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 SRMP19623 302 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 FKBP2P26885 142 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ABCD3P28288 659 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 GRPRP30550 384 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 PSMB10P40306 273 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 APOBEC1P41238 236 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 KIR2DL3P43628 341 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 DUSP3P51452 185 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 MMP15P51511 669 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 RIDAP52758 137 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ART1P52961 327 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 EMP2P54851 167 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 DCDP81605 110 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 GLO1Q04760 184 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 C17orf67Q0P5P2 114 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 MADCAM1Q13477 382 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms