RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 FGF11Q92914 225 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SNF8Q96H20 258 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 VSIG2Q96IQ7 327 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 B3GALT6Q96L58 329 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 TECTBQ96PL2 329 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SORT1Q99523 831 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 P2RY13Q9BPV8 354 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 RNF126Q9BV68 326 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 DEFB126Q9BYW3 111 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 POLR2J2Q9GZM3 115 aaKnown RBP3.19□□□□□ -1.9
BRCA1-212ENST00000473961 NDEL1Q9GZM8 345 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 ACTR6Q9GZN1 396 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 POLR2J3Q9H1A7 115 aaKnown RBP3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SH2D2AQ9NP31 389 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SAR1AQ9NR31 198 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 GLRX2Q9NS18 164 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 FKBP14Q9NWM8 211 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 MARCH5Q9NX47 278 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 B4GALT7Q9UBV7 327 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 RWDD2AQ9UIY3 292 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 PITPNC1Q9UKF7 332 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 PSME2Q9UL46 239 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 CARMIL3Q8ND23 1372 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 MED23Q9ULK4 1368 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 PXDNLA1KZ92 1463 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 NEO1Q92859 1461 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 RALGAPA1Q6GYQ0 2036 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 IFT172Q9UG01 1749 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 AGLP35573 1532 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 TOPBP1Q92547 1522 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 FRMPD1Q5SYB0 1578 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 TNRQ92752 1358 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 A0A1W2PPV9 198 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 CENPBD1B2RD01 187 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 TMEM114B3SHH9 223 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 BOLA2-SMG1P6H3BVE0 249 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 K7N7A8 449 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 L7N2F9 121 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 DNALI1O14645 258 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 AIM2O14862 343 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 MBTPS2O43462 519 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 PSMG1O95456 288 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 FGFR1OPO95684 399 aaKnown RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 SHBGP04278 402 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 GAPDHP04406 335 aaKnown RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 UBTFL6P0CB48 400 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 TCN1P20061 433 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 GABRR1P24046 479 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 FASP25445 335 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 CRABP2P29373 138 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 AQP1P29972 269 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 HMOX2P30519 316 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 HNRNPH3P31942 346 aaKnown RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 GTF2H1P32780 548 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 UGT2B15P54855 530 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 FBXW4P57775 412 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 TIMM10P62072 90 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 RPS14P62263 151 aaKnown RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 CSNK1G2P78368 415 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 SLC1A5Q15758 541 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 CHRNA6Q15825 494 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 LPAL2Q16609 132 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 HSP90AA4PQ58FG1 418 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 GPRC6AQ5T6X5 926 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 OR2G6Q5TZ20 316 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 C9orf135Q5VTT2 229 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 WDR59Q6PJI9 974 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 SLC25A48Q6ZT89 311 aaKnown RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 LYG1Q8N1E2 194 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 GTPBP8Q8N3Z3 284 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-212ENST00000473961 B3GNT7Q8NFL0 401 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 OR10H4Q8NGA5 316 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 TYMSOSQ8TAI1 123 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 DDI1Q8WTU0 396 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 BIRC8Q96P09 236 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 OXGR1Q96P68 337 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 OR8B4Q96RC9 309 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 MBOAT4Q96T53 435 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 ECSITQ9BQ95 431 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 SELENOSQ9BQE4 189 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 SLC7A5P2Q9GIP4 190 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 SLC25A22Q9H936 323 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 EXD2Q9NVH0 621 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 GID8Q9NWU2 228 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 IL20Q9NYY1 176 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 GCNT4Q9P109 453 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 UVRAGQ9P2Y5 699 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 UGT2A1Q9Y4X1 527 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 HEY1Q9Y5J3 304 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 HCFC1P51610 2035 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 MYH7BA7E2Y1 1941 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 KIF20BQ96Q89 1820 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 DLC1Q96QB1 1528 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 SNED1Q8TER0 1413 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 MROH7-TTC4A0A0A0MT08 1334 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 WDR19Q8NEZ3 1342 aa3.18□□□□□ -1.9
BRCA1-212ENST00000473961 N4BP2Q86UW6 1770 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 CEP170BQ9Y4F5 1589 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 DLG5Q8TDM6 1919 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms