RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TMED5Q9Y3A6 229 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 EXOSC1Q9Y3B2 195 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 GMPPBQ9Y5P6 360 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TRAV26-1A0A087WT03 109 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 A0A096LNT2 108 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 ERICH2A1L162 156 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SMCO3A2RU48 225 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 BTBD17A6NE02 478 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 TUBAL3A6NHL2 446 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 ZSCAN5BA6NJL1 495 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 NPIPA7E9PJI5 369 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 PDLIM1O00151 329 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 KPNA3O00505 521 aaPredicted RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 MED7O43513 233 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 IDH3BO43837 385 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 FAM189A1O60320 539 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 HUS1O60921 280 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 NXPH4O95158 308 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 F10P00742 488 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 KLK3P07288 261 aaPredicted RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 CLTAP09496 248 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 NPIPA8P0DM63 369 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SLC2A3P11169 496 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 BCKDHAP12694 445 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 TPSB2P20231 275 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SERPINA2P20848 420 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 AK4P27144 223 aaPredicted RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 TIMP3P35625 211 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 HMGCLP35914 325 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 TAGLN2P37802 199 aaKnown RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 RPL13AP40429 203 aaKnown RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 GRIA1P42261 906 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 MAGEA8P43361 318 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 FNTAP49354 379 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 GFERP55789 205 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 NUP107P57740 925 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 RPL23AP62750 156 aaKnown RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 ARG2P78540 354 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 MS4A2Q01362 244 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 EWSR1Q01844 656 aaKnown RBP eCLIP1.89□□□□□ -2.11
CALD1-216ENST00000473714 ACY1Q03154 408 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 LOXL1Q08397 574 aaPredicted RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 PUDPQ08623 228 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 IL18R1Q13478 541 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 PEX6Q13608 980 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SLC10A1Q14973 349 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 ABRAXAS2Q15018 415 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 TPSAB1Q15661 275 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 CD226Q15762 336 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 DPYSL2Q16555 572 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SNAI3Q3KNW1 292 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 FBXL19-AS1Q494R0 122 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 GGTA1PQ4G0N0 100 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 TEX44Q53QW1 395 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 DCST2Q5T1A1 773 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 OTUD3Q5T2D3 398 aaPredicted RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 PRAMEF5Q5TYX0 476 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 PRAMEF6Q5VXH4 476 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 FAM219BQ5XKK7 198 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 EMBQ6PCB8 327 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 RFWD3Q6PCD5 774 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 ZYG11AQ6WRX3 759 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 HACD2Q6Y1H2 254 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 GDPGP1Q6ZNW5 385 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 Q6ZRP5 223 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 CYS1Q717R9 158 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 CENPQQ7L2Z9 268 aaPredicted RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 MOB3BQ86TA1 216 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 IFNEQ86WN2 208 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 ITPRIPQ8IWB1 547 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 CD302Q8IX05 232 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SLC35F2Q8IXU6 374 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 CLEC4FQ8N1N0 589 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 TMEM86AQ8N2M4 240 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 DHRSXQ8N5I4 330 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 LRRC52Q8N7C0 313 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 DCAF4L2Q8NA75 395 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 OR9K2Q8NGE7 335 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 OR5D13Q8NGL4 314 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 OR8J1Q8NGP2 316 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 LINC01560Q8TB33 94 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 FAM57AQ8TBR7 257 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 GTF3AQ92664 365 aaKnown RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 EMG1Q92979 244 aaKnown RBP1.89□□□□□ -2.11
CALD1-216ENST00000473714 C12orf66Q96MD2 445 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 TGM7Q96PF1 710 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 OR5B2Q96R09 309 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 ELOVL4Q9GZR5 314 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 METTL7AQ9H8H3 244 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 JPT2Q9H910 190 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SDF2L1Q9HCN8 221 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 RAB18Q9NP72 206 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SLC17A5Q9NRA2 495 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 UFSP2Q9NUQ7 469 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 RAB20Q9NX57 234 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 SLC2A8Q9NY64 477 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 BFARQ9NZS9 450 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 GALPQ9UBC7 116 aa1.89□□□□□ -2.11
CALD1-216ENST00000473714 CACNG5Q9UF02 275 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms