RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 SIAEQ9HAT2 523 aa16.07■□□□□ 0.16
CCDC88B-206ENST00000473405 MAN2C1Q9NTJ4 1040 aa16.07■□□□□ 0.16
CCDC88B-206ENST00000473405 CMTM6Q9NX76 183 aa16.07■□□□□ 0.16
CCDC88B-206ENST00000473405 TAAR3PQ9P1P4 343 aa16.07■□□□□ 0.16
CCDC88B-206ENST00000473405 ARMCX1Q9P291 453 aa16.07■□□□□ 0.16
CCDC88B-206ENST00000473405 TANC2Q9HCD6 1990 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 ELOVL7A1L3X0 281 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 MGRN1O60291 552 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 IGHMP01871 453 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 GPR6P46095 362 aaPredicted RBP16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 UCP2P55851 309 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 SELENOWP63302 87 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 ST3GAL3Q11203 375 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 FHL1Q13642 323 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 ALG10Q5BKT4 473 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 PABPC1L2AQ5JQF8 200 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 VTCN1Q7Z7D3 282 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 POU5F2Q8N7G0 328 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 CLDN22Q8N7P3 220 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 ZNF519Q8TB69 540 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 SYNPRQ8TBG9 265 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 NARFLQ9H6Q4 476 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 STX18Q9P2W9 335 aaKnown RBP16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 TMEFF2Q9UIK5 374 aaPredicted RBP16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 SNX13Q9Y5W8 968 aa16.06■□□□□ 0.16
CCDC88B-206ENST00000473405 IQCMA0A1B0GVH7 501 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 C17orf100A8MU93 164 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 SLC22A2O15244 555 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 PTHP01270 115 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 LCKP06239 509 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 SAGP10523 405 aaPredicted RBP16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 IFI30P13284 250 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 ZNF32P17041 273 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 MAKP20794 623 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 DVL1P1P54792 670 aaPredicted RBP16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 GUCY1A3Q02108 690 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 PLP2Q04941 152 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 CD47Q08722 323 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 TOP3AQ13472 1001 aaPredicted RBP16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 TMEM255AQ5JRV8 349 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 SLC25A47Q6Q0C1 308 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 UGT2A3Q6UWM9 527 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 MEX3DQ86XN8 651 aaKnown RBP16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 ZNF101Q8IZC7 436 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 OFCC1Q8IZS5 231 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 OR1J2Q8NGS2 313 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 NSMAFQ92636 917 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 GTF3AQ92664 365 aaKnown RBP16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 C19orf24Q9BVV8 132 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 BCL2L14Q9BZR8 327 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 CCDC134Q9H6E4 229 aa16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 HINT3Q9NQE9 182 aaKnown RBP16.05■□□□□ 0.16
CCDC88B-206ENST00000473405 B4DSR2 109 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 FAM157AC9JC47 383 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 J3KTA2 159 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 FFAR1O14842 300 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 WNT5AP41221 380 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 RAD52P43351 418 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 TMEM33P57088 247 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 CCL8P80075 99 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 HSF2Q03933 536 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 IGFN1Q86VF2 1251 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 NRMQ8IXM6 262 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 LRRC75AQ8NAA5 344 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 C11orf40Q8WZ69 217 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 POM121L2Q96KW2 1035 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 ALG12Q9BV10 488 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 SLCO1C1Q9NYB5 712 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 RHCGQ9UBD6 479 aa16.04■□□□□ 0.16
CCDC88B-206ENST00000473405 LOC100509620A0A075B734 347 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 TRAV27A0A087WT01 109 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 HTR3EA5X5Y0 456 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 PPIHO43447 177 aaKnown RBP16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 IGHV3-13P01766 116 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 STOMP27105 288 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 APLNRP35414 380 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 YAP1P46937 504 aaKnown RBP16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 SELENOVP59797 346 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 RPL27P61353 136 aaKnown RBP16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 LMO4P61968 165 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 ERVK-25P63136 954 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 GLO1Q04760 184 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 TAF11Q15544 211 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 PCGF3Q3KNV8 242 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 FAM27BQ5VT28 67 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 TMEM154Q6P9G4 183 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 RINLQ6ZS11 566 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 SLC15A3Q8IY34 581 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 ICA1LQ8NDH6 482 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 OR1J1Q8NGS3 322 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 AKR7LQ8NHP1 331 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 SNX33Q8WV41 574 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 LZICQ8WZA0 190 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 ZNF416Q9BWM5 594 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 LRMDAQ9H2I8 198 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 CCNB1IP1Q9NPC3 277 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 NKIRAS2Q9NYR9 191 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 GPR160Q9UJ42 338 aa16.03■□□□□ 0.16
CCDC88B-206ENST00000473405 NME4O00746 187 aa16.02■□□□□ 0.16
CCDC88B-206ENST00000473405 PRSS23O95084 383 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms