RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 SIRT4Q9Y6E7 314 aaPredicted RBP8.35□□□□□ -1.07
VPS52-216ENST00000471309 IGKV1D-43A0A0B4J1Z2 117 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 PNMA8CA0A1B0GUJ8 204 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 METTL15A6NJ78 407 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 ZNF593O00488 134 aaPredicted RBP8.34□□□□□ -1.07
VPS52-216ENST00000471309 OGG1O15527 345 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 CYTIPO60759 359 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 RGS9O75916 674 aaPredicted RBP8.34□□□□□ -1.07
VPS52-216ENST00000471309 CLPXO76031 633 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 AQP8O94778 261 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 ZNF432O94892 652 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 GPANK1O95872 356 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 KRT8P05787 483 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 SPARCP09486 303 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 TACSTD2P09758 323 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 PSKH1P11801 424 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 ZNF24P17028 368 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 LAP3P28838 519 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 CSNK1A1P48729 337 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 FABP5Q01469 135 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 ROM1Q03395 351 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 SLC10A1Q14973 349 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 C10orf128Q5T292 105 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 SLC18B1Q6NT16 456 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 RPL22L1Q6P5R6 122 aaKnown RBP8.34□□□□□ -1.07
VPS52-216ENST00000471309 KCTD18Q6PI47 426 aaPredicted RBP8.34□□□□□ -1.07
VPS52-216ENST00000471309 SLC25A47Q6Q0C1 308 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 ARL9Q6T311 187 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 ZIC4Q8N9L1 334 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 TBC1D15Q8TC07 691 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 ZFAND2BQ8WV99 257 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 TMEM54Q969K7 222 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 TMEM203Q969S6 136 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 INTS12Q96CB8 462 aaKnown RBP8.34□□□□□ -1.07
VPS52-216ENST00000471309 SMIM19Q96E16 107 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 PGLYRP3Q96LB9 341 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 ZNF385AQ96PM9 386 aaKnown RBP8.34□□□□□ -1.07
VPS52-216ENST00000471309 OR8B4Q96RC9 309 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 TM9SF2Q99805 663 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 TTYH2Q9BSA4 534 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 TMED9Q9BVK6 235 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 SLIRPQ9GZT3 109 aaKnown RBP8.34□□□□□ -1.07
VPS52-216ENST00000471309 RNF167Q9H6Y7 350 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 SLC24A3Q9HC58 644 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 DKK4Q9UBT3 224 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 MRM2Q9UI43 246 aaKnown RBP8.34□□□□□ -1.07
VPS52-216ENST00000471309 KCNG2Q9UJ96 466 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 GRIP1Q9Y3R0 1128 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 A3GALT2U3KPV4 340 aa8.34□□□□□ -1.07
VPS52-216ENST00000471309 MED13Q9UHV7 2174 aa8.34□□□□□ -1.08
VPS52-216ENST00000471309 IGKV3D-15A0A087WSY6 115 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 TRGV5A0A0B4J1U4 118 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 GABRPO00591 440 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 MAGEB4O15481 346 aaPredicted RBP8.33□□□□□ -1.08
VPS52-216ENST00000471309 LRRTM2O43300 516 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 GPRIN2O60269 458 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 UPK3AO75631 287 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 SC5DO75845 299 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 IL1AP01583 271 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 IGHG3P01860 377 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 OR8G3PP0DMU2 310 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 ZNF823P16415 610 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 PEX19P40855 299 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 RPS27P42677 84 aaKnown RBP8.33□□□□□ -1.08
VPS52-216ENST00000471309 GDI2P50395 445 aaKnown RBP8.33□□□□□ -1.08
VPS52-216ENST00000471309 SIRPAP78324 504 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 KCNMB1Q16558 191 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 MEP1BQ16820 701 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 RNFT1Q5M7Z0 435 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 CARD17Q5XLA6 110 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 RPTNQ6XPR3 784 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 FOXL2NBQ6ZUU3 175 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 FCRLAQ7L513 359 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 ZADH2Q8N4Q0 377 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 MS4A15Q8N5U1 240 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 OR10H5Q8NGA6 315 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 OR6N1Q8NGY5 312 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 OR52N5Q8NH56 324 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 RNF128Q8TEB7 428 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 ABTB1Q969K4 478 aaPredicted RBP8.33□□□□□ -1.08
VPS52-216ENST00000471309 MCHR2Q969V1 340 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 RNF166Q96A37 237 aaPredicted RBP8.33□□□□□ -1.08
VPS52-216ENST00000471309 TMEM45BQ96B21 275 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 ZNF845Q96IR2 970 aaPredicted RBP8.33□□□□□ -1.08
VPS52-216ENST00000471309 KCTD7Q96MP8 289 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 FOXN4Q96NZ1 517 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 AMELYQ99218 206 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 MED18Q9BUE0 208 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 ABHD6Q9BV23 337 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 KCNN2Q9H2S1 579 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 GLTPQ9NZD2 209 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
VPS52-216ENST00000471309 IKZF2Q9UKS7 526 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 MCTS1Q9ULC4 181 aaKnown RBP8.33□□□□□ -1.08
VPS52-216ENST00000471309 GSTK1Q9Y2Q3 226 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 UGT2A1Q9Y4X1 527 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 LIPGQ9Y5X9 500 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 FLVCR1Q9Y5Y0 555 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 PMF1-BGLAPU3KQ54 211 aa8.33□□□□□ -1.08
VPS52-216ENST00000471309 CEP250Q9BV73 2442 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms