RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 EFNB3Q15768 340 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 CLEC12BQ2HXU8 276 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 SLC36A2Q495M3 483 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 FAM27BQ5VT28 67 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 TMEM53Q6P2H8 277 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 THSD4Q6ZMP0 1018 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 FOXL2NBQ6ZUU3 175 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 SLC16A14Q7RTX9 510 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 BIVMQ86UB2 503 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 POP5Q969H6 163 aaKnown RBP12.23□□□□□ -0.45
TOP3B-215ENST00000470338 ASB9Q96DX5 294 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 FBXO17Q96EF6 278 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 Q96M85 177 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 MAGIXQ9H6Y5 334 aa12.23□□□□□ -0.45
TOP3B-215ENST00000470338 YLPM1P49750 1951 aaKnown RBP12.23□□□□□ -0.45
TOP3B-215ENST00000470338 SLC22A23A1A5C7 686 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 VSTM5A8MXK1 200 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 H7C1Q1 480 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 ACOT8O14734 319 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 UBOX5O94941 541 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 TNK1Q13470 666 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 RAB35Q15286 201 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 MESTQ5EB52 335 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 GPR139Q6DWJ6 353 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 C1orf94Q6P1W5 598 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 VHLLQ6RSH7 139 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 DPY19L2P2Q6ZN68 376 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 LRRC18Q8N456 261 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 NSMAFQ92636 917 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 CLPTM1LQ96KA5 538 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 PLK3Q9H4B4 646 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 GSX1Q9H4S2 264 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-215ENST00000470338 RNF121Q9H920 327 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 TMCC3Q9ULS5 477 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 SPEF1Q9Y4P9 236 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 ZFHX3Q15911 3703 aa12.22□□□□□ -0.45
TOP3B-215ENST00000470338 TMEM129A0AVI4 362 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 PRSS37A4D1T9 235 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 XKRYO14609 159 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 OR10H3O60404 316 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 TXNDC12O95881 172 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 PTHP01270 115 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 FPR3P25089 353 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 SDHAP31040 664 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 GLRXP35754 106 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 IFNGR2P38484 337 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 GSSP48637 474 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 TRAP1Q12931 704 aaKnown RBP12.21□□□□□ -0.45
TOP3B-215ENST00000470338 SNTB2Q13425 540 aaKnown RBP12.21□□□□□ -0.45
TOP3B-215ENST00000470338 SGCAQ16586 387 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 KRT80Q6KB66 452 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 SLC7A6OSQ96CW6 309 aaPredicted RBP12.21□□□□□ -0.45
TOP3B-215ENST00000470338 ZNF570Q96NI8 536 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 DOK1Q99704 481 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 SMR3AQ99954 134 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 THTPAQ9BU02 230 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 TRIM15Q9C019 465 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 KCNN2Q9H2S1 579 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 C1orf198Q9H425 327 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 IL20RAQ9UHF4 553 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 FBXO9Q9UK97 447 aaPredicted RBP12.21□□□□□ -0.45
TOP3B-215ENST00000470338 IER3IP1Q9Y5U9 82 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 LYVE1Q9Y5Y7 322 aa12.21□□□□□ -0.45
TOP3B-215ENST00000470338 NF1P21359 2839 aa12.21□□□□□ -0.46
TOP3B-215ENST00000470338 TEX13CA0A0J9YWL9 993 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 H7C1C5 153 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 SSX4O60224 188 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 F12P00748 615 aaPredicted RBP12.2□□□□□ -0.46
TOP3B-215ENST00000470338 CST2P09228 141 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 APEHP13798 732 aaKnown RBP12.2□□□□□ -0.46
TOP3B-215ENST00000470338 ZNF32P17041 273 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 EFNA4P52798 201 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 NUDT6P53370 316 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
TOP3B-215ENST00000470338 LCN6P62502 163 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 PLP2Q04941 152 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 TSPAN31Q12999 210 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 KRR1Q13601 381 aaKnown RBP12.2□□□□□ -0.46
TOP3B-215ENST00000470338 RFX4Q33E94 735 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 FAM98BQ52LJ0 330 aaKnown RBP12.2□□□□□ -0.46
TOP3B-215ENST00000470338 PGBD2Q6P3X8 592 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 PGM2L1Q6PCE3 622 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 LINC00471Q8N535 108 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 CPEB3Q8NE35 698 aaKnown RBP12.2□□□□□ -0.46
TOP3B-215ENST00000470338 SLC30A7Q8NEW0 376 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 OR4C15Q8NGM1 316 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 GNPDA2Q8TDQ7 276 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 RASD2Q96D21 266 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 VSX1Q9NZR4 365 aaPredicted RBP12.2□□□□□ -0.46
TOP3B-215ENST00000470338 SLC7A8Q9UHI5 535 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 CMAHPQ9Y471 501 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 C2CD3Q4AC94 2353 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 CSPG4Q6UVK1 2322 aa12.2□□□□□ -0.46
TOP3B-215ENST00000470338 TLN2Q9Y4G6 2542 aa12.19□□□□□ -0.46
TOP3B-215ENST00000470338 IQCMA0A1B0GVH7 501 aa12.19□□□□□ -0.46
TOP3B-215ENST00000470338 FAM171A2A8MVW0 826 aa12.19□□□□□ -0.46
TOP3B-215ENST00000470338 TNFRSF11BO00300 401 aa12.19□□□□□ -0.46
TOP3B-215ENST00000470338 IMPA2O14732 288 aa12.19□□□□□ -0.46
TOP3B-215ENST00000470338 ARPC3O15145 178 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms