RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 MYOTQ9UBF9 498 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 FBXO4Q9UKT5 387 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ST3GAL6Q9Y274 331 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SLC17A4Q9Y2C5 497 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 EXOSC1Q9Y3B2 195 aaKnown RBP4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TMED3Q9Y3Q3 217 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ARHGEF5Q12774 1597 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 NWD1Q149M9 1564 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 EDC4Q6P2E9 1401 aaKnown RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 NALCNQ8IZF0 1738 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 A0A0G2JN53 185 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 FAM237BA0A1B0GVD1 139 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 A0A1W2PQM1 296 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 C7orf66A4D0T2 115 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 LRIT2A6NDA9 550 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM200CA6NKL6 621 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF724A8MTY0 619 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 M0QZ24 198 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 GPR31O00270 319 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 UPK1AO00322 258 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 KLK10O43240 276 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SYNGR3O43761 229 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 PDE6DO43924 150 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 PSPNO60542 156 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CEACAM4O75871 244 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 MOCS3O95396 460 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 MPIG6BO95866 241 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 GCGP01275 180 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 HLA-DQB1P01920 261 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 MT-ND4P03905 459 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 UMODP07911 640 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 UCHL1P09936 223 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OR5AC1P0C628 307 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CREB1P16220 341 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 GABRB1P18505 474 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 GGT1P19440 569 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SPINK2P20155 84 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OMGP23515 440 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 HTR2CP28335 458 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 RBMS1P29558 406 aaKnown RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 IL2RGP31785 369 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 ADRA1AP35348 466 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 PIGAP37287 484 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 GEMP55040 296 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 GP2P55259 537 aaKnown RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 STXBP1P61764 594 aaKnown RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 RPL7AP62424 266 aaKnown RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 EFNB1P98172 346 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 PAX2Q02962 417 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CRHR2Q13324 411 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OPCMLQ14982 345 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 HERPUD1Q15011 391 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 PDCD1Q15116 288 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 ASPRV1Q53RT3 343 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CBWD3Q5JTY5 395 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SAMD4BQ5PRF9 694 aaKnown RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CBWD5Q5RIA9 395 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 C1orf194Q5T5A4 169 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SUSD4Q5VX71 490 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM236Q5W0B7 351 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CD276Q5ZPR3 534 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OR52W1Q6IF63 320 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CES5AQ6NT32 575 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 FAHD1Q6P587 224 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SLC27A1Q6PCB7 646 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 ENPP6Q6UWR7 440 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 C17orf99Q6UX52 265 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 HACD2Q6Y1H2 254 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 MBOAT2Q6ZWT7 520 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CPEB2Q7Z5Q1 589 aaKnown RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SLC35E3Q7Z769 313 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 P2RY8Q86VZ1 359 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SIAH3Q8IW03 269 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CMTM8Q8IZV2 173 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM251Q8N6I4 163 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CDRT4Q8N9R6 151 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SLC30A7Q8NEW0 376 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SLC26A10Q8NG04 563 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OR10AD1Q8NGE0 317 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OR4D9Q8NGE8 314 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OR52L2PQ8NGH6 319 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OR51S1Q8NGJ8 323 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OR10D4PQ8NGN7 298 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 CASTOR1Q8WTX7 329 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 HOXB13Q92826 284 aaPredicted RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 GLYATL1Q969I3 302 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 COQ2Q96H96 371 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM176AQ96HP8 235 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 FCRL5Q96RD9 977 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SYT3Q9BQG1 590 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SYT11Q9BT88 431 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 ST6GALNAC5Q9BVH7 336 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 C1orf43Q9BWL3 253 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SEC11CQ9BY50 192 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 BARHL1Q9BZE3 327 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 EGLN3Q9H6Z9 239 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 METTL17Q9H7H0 456 aaPredicted RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 WDR76Q9H967 626 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 LRTM1Q9HBL6 345 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 GCM1Q9NP62 436 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms