RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 PGDP52209 483 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 FOXL2P58012 376 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 RPS15P62841 145 aaKnown RBP12.59□□□□□ -0.39
GPC1-208ENST00000469694 SHBQ15464 509 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 TP53I3Q53FA7 332 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 PRAMEF8Q5VWM4 474 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 PRAMEF7Q5VXH5 474 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 FCRLBQ6BAA4 426 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 PWWP2BQ6NUJ5 590 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 UNQ9370/PRO34162Q6UXP9 181 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 TTLL10Q6ZVT0 673 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 KCNRGQ8N5I3 272 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 COX18Q8N8Q8 333 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 OR52L1Q8NGH7 329 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 PHYHIPLQ96FC7 376 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 MRPL48Q96GC5 212 aaKnown RBP12.59□□□□□ -0.39
GPC1-208ENST00000469694 MCHR1Q99705 422 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 DUSP15Q9H1R2 295 aaPredicted RBP12.59□□□□□ -0.39
GPC1-208ENST00000469694 ZNF629Q9UEG4 869 aaPredicted RBP12.59□□□□□ -0.39
GPC1-208ENST00000469694 CARHSP1Q9Y2V2 147 aaKnown RBP12.59□□□□□ -0.39
GPC1-208ENST00000469694 PI4KAP42356 2102 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 TMEM131Q92545 1883 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 KANTRA0A1W2PQU2 76 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 TMEM82A0PJX8 343 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 TRAPPC13A5PLN9 417 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 MAGEB4O15481 346 aaPredicted RBP12.59□□□□□ -0.39
GPC1-208ENST00000469694 GATCO43716 136 aaKnown RBP12.59□□□□□ -0.39
GPC1-208ENST00000469694 RAB40ALP0C0E4 278 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 CLUP10909 449 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 CDK2P24941 298 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 CLDN12P56749 244 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 SNRPEP62304 92 aaKnown RBP12.59□□□□□ -0.39
GPC1-208ENST00000469694 DCST2Q5T1A1 773 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 OR2I1PQ8NGU4 316 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 RAB40AQ8WXH6 277 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 HAVCR1Q96D42 359 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 ZNF75AQ96N20 296 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 TTTY10Q9BZA0 68 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 NIT2Q9NQR4 276 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 CMC2Q9NRP2 79 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 MBD2Q9UBB5 411 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 CLDN16Q9Y5I7 305 aa12.59□□□□□ -0.39
GPC1-208ENST00000469694 FAM86C2PA6NEL3 165 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 HEXAP06865 529 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 RNH1P13489 461 aaKnown RBP12.58□□□□□ -0.4
GPC1-208ENST00000469694 BMP7P18075 431 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 FOXK2Q01167 660 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 RBMS3Q6XE24 437 aaKnown RBP12.58□□□□□ -0.4
GPC1-208ENST00000469694 ZNF836Q6ZNA1 936 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 RFLNBQ8N5W9 214 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 ZNF614Q8N883 585 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 CTHRC1Q96CG8 243 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 PELI1Q96FA3 418 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 RBM18Q96H35 190 aaKnown RBP12.58□□□□□ -0.4
GPC1-208ENST00000469694 ARL5BQ96KC2 179 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 NUDT22Q9BRQ3 303 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 DPH1Q9BZG8 443 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 NOX4Q9NPH5 578 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 MKL2Q9ULH7 1088 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 ZNF879B4DU55 563 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 TMEM150CB9EJG8 249 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 PIN1P1O15428 100 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 SLC2A5P22732 501 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 FAUP35544 74 aaKnown RBP12.58□□□□□ -0.4
GPC1-208ENST00000469694 MNDAP41218 407 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 ACTC1P68032 377 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 ACTA1P68133 377 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 SIRPAP78324 504 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
GPC1-208ENST00000469694 ARHGAP11BQ3KRB8 267 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 FAM122BQ7Z309 247 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.58□□□□□ -0.4
GPC1-208ENST00000469694 UBALD2Q8IYN6 164 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 PRSS58Q8IYP2 241 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 C15orf40Q8WUR7 153 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 ZDHHC12Q96GR4 267 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 TLNRD1Q9H1K6 362 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 OR51M1Q9H341 326 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 UCK1Q9HA47 277 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 SIDT1Q9NXL6 827 aaKnown RBP12.58□□□□□ -0.4
GPC1-208ENST00000469694 OR5V1Q9UGF6 321 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 SLC7A7Q9UM01 511 aa12.58□□□□□ -0.4
GPC1-208ENST00000469694 ZNF443Q9Y2A4 671 aaPredicted RBP12.58□□□□□ -0.4
GPC1-208ENST00000469694 NDUFS6O75380 124 aaKnown RBP12.57□□□□□ -0.4
GPC1-208ENST00000469694 SLC35E2P0CK97 266 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 FOLR1P15328 257 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 S1PR1P21453 382 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 CD1CP29017 333 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 TAS2R20P59543 309 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 PDZK1IP1Q13113 114 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 NDUFAF6Q330K2 333 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 H3F3CQ6NXT2 135 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 TMEM151BQ8IW70 566 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 SKA3Q8IX90 412 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 ZNF433Q8N7K0 673 aaPredicted RBP12.57□□□□□ -0.4
GPC1-208ENST00000469694 OR4C16Q8NGL9 310 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 HS6ST2Q96MM7 605 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms