RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ZNF208O43345 1280 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 CXCL13O43927 109 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 ENTPD5O75356 428 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 SEC14L2O76054 403 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 RCBTB2O95199 551 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 NQO1P15559 274 aaKnown RBP5.51□□□□□ -1.53
PTCD3-208ENST00000469585 CCNA2P20248 432 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 PSMA4P25789 261 aaKnown RBP5.51□□□□□ -1.53
PTCD3-208ENST00000469585 SSTR2P30874 369 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 PCGF2P35227 344 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 RFX2P48378 723 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 OR2B6P58173 313 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TAS2R41P59536 307 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 ADORA2A-AS1P86434 159 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 C1DQ13901 141 aaKnown RBP5.51□□□□□ -1.53
PTCD3-208ENST00000469585 VEZF1Q14119 521 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 GTDC1Q4AE62 458 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 LRRC23Q53EV4 343 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-208ENST00000469585 PAGE3Q5JUK9 113 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TMEM225Q6GV28 225 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 NANOGP8Q6NSW7 305 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 ULK3Q6PHR2 472 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 DHRS4L2Q6PKH6 230 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 CBLN3Q6UW01 205 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 MEX3BQ6ZN04 569 aaKnown RBP5.51□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF836Q6ZNA1 936 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 Q6ZTK2 550 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 PLEKHM3Q6ZWE6 761 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 FCRLAQ7L513 359 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 HDDC2Q7Z4H3 204 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 NOXA1Q86UR1 476 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 VRK2Q86Y07 508 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 FUNDC1Q8IVP5 155 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 CDK20Q8IZL9 346 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 GCNT2Q8N0V5 402 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 UBE2J2Q8N2K1 259 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 OR5M1Q8NGP8 315 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 RNF138Q8WVD3 245 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 ITLN2Q8WWU7 325 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-208ENST00000469585 FIG4Q92562 907 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 SLC38A4Q969I6 547 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 MAL2Q969L2 176 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 RCN3Q96D15 328 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 SLC47A1Q96FL8 570 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TPD52L3Q96J77 140 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 RBM24Q9BX46 236 aaKnown RBP5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TRIM15Q9C019 465 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 KLHL4Q9C0H6 718 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 NANOGQ9H9S0 305 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF226Q9NYT6 803 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TMEM181Q9P2C4 612 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 ICAM5Q9UMF0 924 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TMED7Q9Y3B3 224 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 FAM96BQ9Y3D0 163 aa5.51□□□□□ -1.53
PTCD3-208ENST00000469585 TUBAL3A6NHL2 446 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 OR6C65A6NJZ3 312 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 NPIPB9F8W1W9 429 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 ADAMDEC1O15204 470 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 VAMP5O95183 116 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 GOSR1O95249 250 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 PMS2P2O95744 297 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF682O95780 498 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 GKN3PP0CG01 181 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 UMPSP11172 480 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 POU2F1P14859 743 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 ITGA2P17301 1181 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 RPS4Y1P22090 263 aaKnown RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 MYF6P23409 242 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 IL32P24001 234 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 CLDN18P56856 261 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 SIRPAP78324 504 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 TGFBR3Q03167 851 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 RASGEF1BQ0VAM2 473 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 EPS8Q12929 822 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 HNF4GQ14541 408 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 NPTX1Q15818 432 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 NDUFAF6Q330K2 333 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 SLC25A53Q5H9E4 307 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 SAMD4BQ5PRF9 694 aaKnown RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 FAM91A1Q658Y4 838 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 TTC33Q6PID6 262 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 KLHL24Q6TFL4 600 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 APOOLQ6UXV4 268 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 DLEU7Q6UYE1 221 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 HACD2Q6Y1H2 254 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 NET1Q7Z628 596 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 GALNT5Q7Z7M9 940 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 LUZP2Q86TE4 346 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 CCDC71Q8IV32 467 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 MICU2Q8IYU8 434 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 ARHGAP24Q8N264 748 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 OR6K3Q8NGY3 331 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 FNDC9Q8TBE3 224 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 RNASE6Q93091 150 aaKnown RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 NTNG2Q96CW9 530 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 ZC3HAV1LQ96H79 300 aaKnown RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 CCT8L2Q96SF2 557 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 MED18Q9BUE0 208 aa5.5□□□□□ -1.53
PTCD3-208ENST00000469585 POLR2J2Q9GZM3 115 aaKnown RBP5.5□□□□□ -1.53
PTCD3-208ENST00000469585 POLR2J3Q9H1A7 115 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms