RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PLA2G12AQ9BZM1 189 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC19A3Q9BZV2 496 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 OR2B2Q9GZK3 357 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ADNPQ9H2P0 1102 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 OR52D1Q9H346 318 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 UBQLN3Q9H347 655 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 Q9H521 79 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 RERGLQ9H628 205 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 MCCC2Q9HCC0 563 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 C8orf4Q9NR00 106 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 RASSF1Q9NS23 344 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF229Q9UJW7 825 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF346Q9UL40 294 aaKnown RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 MRPS18CQ9Y3D5 142 aaKnown RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 IER3IP1Q9Y5U9 82 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 AP4B1Q9Y6B7 739 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SPTBN4Q9H254 2564 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 EXPH5Q8NEV8 1989 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 A0A1W2PRG6 482 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ARRDC5A6NEK1 342 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 EIF4E1BA6NMX2 242 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF726A6NNF4 738 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF814B7Z6K7 855 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 MCIDASD6RGH6 385 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 MS4A18H0YCH9 400 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 H0YIZ8 118 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 H0YJX3 145 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 PLPP3O14495 311 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ARHGEF9O43307 516 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 TLX2O43763 284 aaPredicted RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 RAMP1O60894 148 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 NPIPB7O75200 414 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 PEX14O75381 377 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ACTL6AO96019 429 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 MT-ATP6P00846 226 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CRYABP02511 175 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 HMGN1P05114 100 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 RPSAP08865 295 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 GNAO1P09471 354 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 NPSP0C0P6 89 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ASAH2BP0C7U1 165 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 HLA-DOBP13765 273 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ACADSP16219 412 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF17P17021 662 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 FKBP2P26885 142 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ELK4P28324 431 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 FMO3P31513 532 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 GGT2P36268 569 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ACVR1BP36896 505 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 HSPA13P48723 471 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CLK1P49759 484 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 LHX2P50458 406 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 RPS6KA3P51812 740 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SMSP52788 366 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 DLX5P56178 289 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CDC42P60953 191 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SUMO2P61956 95 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ESRRGP62508 458 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CSNK2A1P68400 391 aaPredicted RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 RPL18Q07020 188 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 KLRB1Q12918 225 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 MED21Q13503 144 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 MELKQ14680 651 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 MFSD13AQ14CX5 517 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 PDK3Q15120 406 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ST3GAL2Q16842 350 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 HYAL4Q2M3T9 481 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 TMEM44Q2T9K0 475 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 MS4A18Q3C1V0 323 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 PRR30Q53SZ7 412 aaPredicted RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 EEF1A1P5Q5VTE0 462 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CARD17Q5XLA6 110 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 KRT80Q6KB66 452 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC27A4Q6P1M0 643 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 C5orf46Q6UWT4 87 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 DPY19L2P2Q6ZN68 376 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF620Q6ZNG0 422 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 Q6ZWC4 215 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 P4HA3Q7Z4N8 544 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 BCDIN3DQ7Z5W3 292 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CCDC28AQ8IWP9 274 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 UEVLDQ8IX04 471 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 MCEMP1Q8IX19 187 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 C8orf59Q8N0T1 100 aaPredicted RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 TCEANCQ8N8B7 351 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 BPIFB6Q8NFQ5 453 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 OR2T33Q8NG76 320 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 OR52E2Q8NGJ4 325 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 OR8D4Q8NGM9 314 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 OR4Q3Q8NH05 313 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 OR10D3Q8NH80 312 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 FAM81AQ8TBF8 368 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SNRNP27Q8WVK2 155 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 PNPLA2Q96AD5 504 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 RASD2Q96D21 266 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ZHX1-C8orf76Q96EF9 292 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 WDYHV1Q96HA8 205 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 TXNDC15Q96J42 360 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 Q96M85 177 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC38A2Q96QD8 506 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms