RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 TSPYL5Q86VY4 417 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-207ENST00000468385 TREML1Q86YW5 311 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF101Q8IZC7 436 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 LRRC18Q8N456 261 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 OR4D11Q8NGI4 311 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 OR6T1Q8NGN1 323 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 IPCEF1Q8WWN9 437 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-207ENST00000468385 SPDL1Q96EA4 605 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 MARS2Q96GW9 593 aaKnown RBP11.07□□□□□ -0.64
PTPN7-207ENST00000468385 DUX5Q96PT3 197 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 SEPHS2Q99611 448 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 MRPL13Q9BYD1 178 aaKnown RBP11.07□□□□□ -0.64
PTPN7-207ENST00000468385 MMP26Q9NRE1 261 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 UBAP1Q9NZ09 502 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF229Q9UJW7 825 aa11.07□□□□□ -0.64
PTPN7-207ENST00000468385 PRKDCP78527 4128 aaKnown RBP11.07□□□□□ -0.64
PTPN7-207ENST00000468385 ISPDA4D126 451 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 DNAJC9-AS1A6NH13 148 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ZSCAN5BA6NJL1 495 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 KPNA4O00629 521 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 FOXH1O75593 365 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 OPN1SWP03999 348 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 CCNOP22674 350 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF84P51523 738 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF133P52736 654 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 PCBP3P57721 371 aaKnown RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 CLRN1P58418 232 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 DEFA6Q01524 100 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 HSF2Q03933 536 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 SLC3A1Q07837 685 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF718Q3SXZ3 478 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 SPRNQ5BIV9 151 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 PABPC1L2AQ5JQF8 200 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 KLF17Q5JT82 389 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 SPATA46Q5T0L3 261 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 MBNL2Q5VZF2 373 aaKnown RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 TTC33Q6PID6 262 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 EPGNQ6UW88 154 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 RBMS3Q6XE24 437 aaKnown RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 RBM45Q8IUH3 476 aaKnown RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 BCL6BQ8N143 479 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 NOXO1Q8NFA2 376 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 GPR32P1Q8NGA4 272 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 SLC25A40Q8TBP6 338 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ST7LQ8TDW4 575 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 POP5Q969H6 163 aaKnown RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 POM121L2Q96KW2 1035 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF48Q96MX3 618 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF426Q9BUY5 554 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 UNKLQ9H9P5 680 aaKnown RBP11.06□□□□□ -0.64
PTPN7-207ENST00000468385 DCAF16Q9NXF7 216 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF69Q9UC07 566 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 NUP50Q9UKX7 468 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 ANGPT4Q9Y264 503 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 USH1CQ9Y6N9 552 aa11.06□□□□□ -0.64
PTPN7-207ENST00000468385 LOC100509620A0A075B734 347 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 CENPBD1B2RD01 187 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 TRAPPC2LH3BP13 241 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 MGRN1O60291 552 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 TRMUO75648 421 aaKnown RBP11.05□□□□□ -0.64
PTPN7-207ENST00000468385 IGHV2-70P01814 119 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 ADH4P08319 380 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF32P17041 273 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 STOMP27105 288 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 GCH1P30793 250 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 STX1BP61266 288 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 C10orf128Q5T292 105 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 PTOV1Q86YD1 416 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 SYT14Q8NB59 555 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 KLF14Q8TD94 323 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-207ENST00000468385 ADAMTS16Q8TE57 1224 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 GEMIN6Q8WXD5 167 aaKnown RBP11.05□□□□□ -0.64
PTPN7-207ENST00000468385 ASB10Q8WXI3 467 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 NABP1Q96AH0 204 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-207ENST00000468385 SLC19A3Q9BZV2 496 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 OR2J1Q9GZK6 312 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 EGLN1Q9GZT9 426 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 ZMAT3Q9HA38 289 aaKnown RBP11.05□□□□□ -0.64
PTPN7-207ENST00000468385 SIAEQ9HAT2 523 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 NPHS2Q9NP85 383 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 ARGLU1Q9NWB6 273 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-207ENST00000468385 PLEK2Q9NYT0 353 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 CCDC167Q9P0B6 97 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 PURGQ9UJV8 347 aaKnown RBP11.05□□□□□ -0.64
PTPN7-207ENST00000468385 SLC7A7Q9UM01 511 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 CORO2BQ9UQ03 480 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 POLR3KQ9Y2Y1 108 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-207ENST00000468385 NPTNQ9Y639 398 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 TANC2Q9HCD6 1990 aa11.05□□□□□ -0.64
PTPN7-207ENST00000468385 IGKV1D-43A0A0B4J1Z2 117 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 PLSCR5A0PG75 271 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 EVPLLA8MZ36 301 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 BLOC1S5-TXNDC5H3BN57 136 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 M0QX08 132 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 SLC2A10O95528 541 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 HIST1H2ABP04908 130 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 F13BP05160 661 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms