RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 GPANK1O95872 356 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 HIST1H2ABP04908 130 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 HPNP05981 417 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 SBK2P0C263 348 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 RCVRNP35243 200 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 SFTPDP35247 375 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 TMBIM6P55061 237 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 KRR1Q13601 381 aaKnown RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 MELKQ14680 651 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 RNFT1Q5M7Z0 435 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 WIPI1Q5MNZ9 446 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 HIST3H2AQ7L7L0 130 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF367Q7RTV3 350 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 FAM98AQ8NCA5 519 aaKnown RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF420Q8TAQ5 688 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 FCGR1BQ92637 280 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 HIST1H2ACQ93077 130 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 OR5B2Q96R09 309 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 TTTY12Q9BZ98 90 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 RIMS4Q9H426 269 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 ISG20L2Q9H9L3 353 aaKnown RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 TIMMDC1Q9NPL8 285 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 PLSCR4Q9NRQ2 329 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 SERINC1Q9NRX5 453 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 GPR171O14626 319 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 WISP2O76076 250 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 GABARAPO95166 117 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 NR4A1P22736 598 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 GNG10P50151 68 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 FOXC1Q12948 553 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TMPPEQ6ZT21 453 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 LHFPL3Q86UP9 236 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 C9orf43Q8TAL5 461 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SLC25A43Q8WUT9 341 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 RPL3LQ92901 407 aaKnown RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ZMYND19Q96E35 227 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 KCNK17Q96T54 332 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ASPNQ9BXN1 380 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 MRPL13Q9BYD1 178 aaKnown RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TINAGL1Q9GZM7 467 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TSPAN10Q9H1Z9 355 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 DKKL1Q9UK85 242 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 COPS3Q9UNS2 423 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 B3GALT5Q9Y2C3 310 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 HDGFL3Q9Y3E1 203 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 IGLV1-36A0A0B4J1U3 117 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 LOC102725191A0A1B0GVB3 256 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SLC22A31A6NKX4 558 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 AQP7P3A6NL99 342 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 FAM171A2A8MVW0 826 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TRAF3IP2O43734 574 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SCG5P05408 212 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 MRPL3P09001 348 aaKnown RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TFPIP10646 304 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 AHCYP23526 432 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 PSMB9P28065 219 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 RGS6P49758 472 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TNFSF10P50591 281 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 RRADP55042 308 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ETFDHQ16134 617 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 KLHL12Q53G59 568 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF684Q5T5D7 378 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 RAET1LQ5VY80 246 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 CYB5R2Q6BCY4 276 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 PXKQ7Z7A4 578 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 PM20D2Q8IYS1 436 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SMPDL3BQ92485 455 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 OTULINQ96BN8 352 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TRMT61AQ96FX7 289 aaKnown RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SNX18Q96RF0 628 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 MGLLQ99685 303 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 PIGQQ9BRB3 760 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ARHGAP9Q9BRR9 750 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 MED29Q9NX70 200 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SF3B6Q9Y3B4 125 aaKnown RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 A0A1W2PQL4 384 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SLC22A23A1A5C7 686 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 MEX3AA1L020 520 aaKnown RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 PRSS37A4D1T9 235 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SELENOFO60613 162 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TRMUO75648 421 aaKnown RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 IFNGP01579 166 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 IFNGR1P15260 489 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 FKBP2P26885 142 aaKnown RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 PYCR1P32322 319 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 NTF4P34130 210 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ACVR1BP36896 505 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 CCL11P51671 97 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 P2RX3P56373 397 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SPHARQ15513 63 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ARMCX4Q5H9R4 360 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SLC35D3Q5M8T2 416 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ASB18Q6ZVZ8 466 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TRILQ7L0X0 811 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 TIGD4Q8IY51 512 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 LINC00518Q8N0U6 118 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ZFP62Q8NB50 900 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF680Q8NEM1 530 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 GATAD2BQ8WXI9 593 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 MND1Q9BWT6 205 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms