RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 UCK1Q9HA47 277 aa2.27□□□□□ -2.05
XRN1-206ENST00000467077 YAE1D1Q9NRH1 226 aa2.27□□□□□ -2.05
XRN1-206ENST00000467077 DCAF13Q9NV06 445 aaKnown RBP2.27□□□□□ -2.05
XRN1-206ENST00000467077 ACTR3BQ9P1U1 418 aa2.27□□□□□ -2.05
XRN1-206ENST00000467077 DHRS7Q9Y394 339 aa2.27□□□□□ -2.05
XRN1-206ENST00000467077 A0A0U1RQS6 177 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 FAM230AA0A1W2PPH8 454 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 A0A1W2PQ67 120 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 BICDL2A1A5D9 508 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 PDZK1P1A8MUH7 402 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 C9J4A7 227 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 G3V3Y1 287 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 H3BTX0 84 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 PSMD11O00231 422 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 DFFAO00273 331 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 ALOX12BO75342 701 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 LCA5LO95447 670 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 SLC2A10O95528 541 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 JCHAINP01591 159 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 XRCC1P18887 633 aaPredicted RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 IDSP22304 550 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 IGFBP5P24593 272 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 TEAD1P28347 426 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 SDC4P31431 198 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CD86P42081 329 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 SYKP43405 635 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CAPZBP47756 277 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 HTR5AP47898 357 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CSNK1DP48730 415 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 P2RY4P51582 365 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 PPP1CAP62136 330 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 UBE2IP63279 158 aaKnown RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 CSNK1G2P78368 415 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 OTUD4Q01804 1114 aaKnown RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 CKAP4Q07065 602 aaKnown RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 NCF4Q15080 339 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 RAB35Q15286 201 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 INAQ16352 499 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 ADPRMQ3LIE5 342 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 PARP15Q460N3 678 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 PTPN20Q4JDL3 420 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 ZNF658Q5TYW1 1059 aaPredicted RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 MLIPQ5VWP3 458 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 SCYL2Q6P3W7 929 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CERS6Q6ZMG9 384 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CATSPER1Q8NEC5 780 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 ANKRD20A12PQ8NF67 263 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 NT5C3BQ969T7 300 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 ADIPOR1Q96A54 375 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CXorf40BQ96DE9 158 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CELF6Q96J87 481 aaKnown RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 IP6K3Q96PC2 410 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 SMR3AQ99954 134 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 FOXC2Q99958 501 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 RIOK2Q9BVS4 552 aaKnown RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 KAT8Q9H7Z6 458 aaKnown RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 ACTR8Q9H981 624 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 FANCEQ9HB96 536 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 MIEF1Q9NQG6 463 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 ATXN10Q9UBB4 475 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 RPS6KB2Q9UBS0 482 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 SEC14L3Q9UDX4 400 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CFAP45Q9UL16 551 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 BTRCQ9Y297 605 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 PCYT1BQ9Y5K3 369 aaPredicted RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 HRNRQ86YZ3 2850 aaPredicted RBP2.26□□□□□ -2.05
XRN1-206ENST00000467077 ANKRD12Q6UB98 2062 aa2.26□□□□□ -2.05
XRN1-206ENST00000467077 CACNA1CQ13936 2221 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 TLCD2A6NGC4 264 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 FBLL1A6NHQ2 334 aaKnown RBP2.25□□□□□ -2.05
XRN1-206ENST00000467077 OR52A4PA6NMU1 304 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 ANKRD30BLA7E2S9 258 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 KMOO15229 486 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 LCMT2O60294 686 aaKnown RBP2.25□□□□□ -2.05
XRN1-206ENST00000467077 SLC19A2O60779 497 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 AKR7A3O95154 331 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 SOD1P00441 154 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 F10P00742 488 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 CAPN1P07384 714 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 UQCRHP07919 91 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 HBQ1P09105 142 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 ANXA4P09525 319 aaPredicted RBP2.25□□□□□ -2.05
XRN1-206ENST00000467077 RRASP10301 218 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 CMA1P23946 247 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 RORAP35398 523 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 CA7P43166 264 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 OR1D4P47884 311 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 TDGF1P3P51864 188 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 NDUFA8P51970 172 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 WNT4P56705 351 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 TPI1P60174 286 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 AP1S1P61966 158 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 ARG2P78540 354 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 LRRC63Q05C16 580 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 SLC10A7Q0GE19 358 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 EXOSC2Q13868 293 aaKnown RBP2.25□□□□□ -2.05
XRN1-206ENST00000467077 DPYSQ14117 519 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 SERTAD2Q14140 314 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 CCDC14Q49A88 953 aa2.25□□□□□ -2.05
XRN1-206ENST00000467077 ARMC12Q5T9G4 340 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms