RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 FAM222BQ8WU58 562 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 NSMAFQ92636 917 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 NABP1Q96AH0 204 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 WFIKKN1Q96NZ8 548 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 PITX2Q99697 317 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 MED18Q9BUE0 208 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 SIAEQ9HAT2 523 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 TVP23BQ9NYZ1 205 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 ADGRG4Q8IZF6 3080 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 PRR23D1E9PI22 279 aaPredicted RBP14□□□□□ -0.17
GPC1-207ENST00000466624 H0YJX3 145 aa14□□□□□ -0.17
GPC1-207ENST00000466624 DCTN6O00399 190 aa14□□□□□ -0.17
GPC1-207ENST00000466624 SLC16A6O15403 523 aa14□□□□□ -0.17
GPC1-207ENST00000466624 WNT11O96014 354 aa14□□□□□ -0.17
GPC1-207ENST00000466624 PRR23D2P0DMB1 279 aaPredicted RBP14□□□□□ -0.17
GPC1-207ENST00000466624 GGT2P36268 569 aa14□□□□□ -0.17
GPC1-207ENST00000466624 KIR2DL3P43628 341 aa14□□□□□ -0.17
GPC1-207ENST00000466624 CDC42P60953 191 aa14□□□□□ -0.17
GPC1-207ENST00000466624 UBE2NP61088 152 aaKnown RBP14□□□□□ -0.17
GPC1-207ENST00000466624 GLO1Q04760 184 aa14□□□□□ -0.17
GPC1-207ENST00000466624 TAB1Q15750 504 aa14□□□□□ -0.17
GPC1-207ENST00000466624 ETFDHQ16134 617 aa14□□□□□ -0.17
GPC1-207ENST00000466624 ZIK1Q3SY52 487 aaPredicted RBP14□□□□□ -0.17
GPC1-207ENST00000466624 HIKESHIQ53FT3 197 aa14□□□□□ -0.17
GPC1-207ENST00000466624 FAM27BQ5VT28 67 aa14□□□□□ -0.17
GPC1-207ENST00000466624 SP5Q6BEB4 398 aaPredicted RBP14□□□□□ -0.17
GPC1-207ENST00000466624 KLHL24Q6TFL4 600 aa14□□□□□ -0.17
GPC1-207ENST00000466624 MEX3BQ6ZN04 569 aaKnown RBP14□□□□□ -0.17
GPC1-207ENST00000466624 GLB1L2Q8IW92 636 aa14□□□□□ -0.17
GPC1-207ENST00000466624 WDR31Q8NA23 367 aa14□□□□□ -0.17
GPC1-207ENST00000466624 NRG4Q8WWG1 115 aa14□□□□□ -0.17
GPC1-207ENST00000466624 NANOS1Q8WY41 292 aaKnown RBP14□□□□□ -0.17
GPC1-207ENST00000466624 MUCL1Q96DR8 90 aa14□□□□□ -0.17
GPC1-207ENST00000466624 TSSK2Q96PF2 358 aa14□□□□□ -0.17
GPC1-207ENST00000466624 WACQ9BTA9 647 aa14□□□□□ -0.17
GPC1-207ENST00000466624 VCX3BQ9H321 246 aa14□□□□□ -0.17
GPC1-207ENST00000466624 SRA1Q9HD15 236 aaKnown RBP14□□□□□ -0.17
GPC1-207ENST00000466624 ZNF226Q9NYT6 803 aa14□□□□□ -0.17
GPC1-207ENST00000466624 PLEKHB1Q9UF11 243 aaPredicted RBP14□□□□□ -0.17
GPC1-207ENST00000466624 KCNN3Q9UGI6 736 aa14□□□□□ -0.17
GPC1-207ENST00000466624 NDRG4Q9ULP0 352 aaKnown RBP14□□□□□ -0.17
GPC1-207ENST00000466624 COA3Q9Y2R0 106 aaPredicted RBP14□□□□□ -0.17
GPC1-207ENST00000466624 SLC25A15Q9Y619 301 aa14□□□□□ -0.17
GPC1-207ENST00000466624 A0A096LPE4 126 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 A0A1W2PPL8 197 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 A0A1W2PPZ6 126 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 PRODHO43272 600 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 SEC14L2O76054 403 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 GOSR1O95249 250 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 THBDP07204 575 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 GAAP10253 952 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 EPXP11678 715 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 SPI1P17947 270 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 MSR1P21757 451 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 PTDSS1P48651 473 aaKnown RBP13.99□□□□□ -0.17
GPC1-207ENST00000466624 BLVRAP53004 296 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 KEAP1Q14145 624 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 PPA1Q15181 289 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 KCNMB1Q16558 191 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 C22orf34Q6ZV56 151 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 FAM169BQ8N8A8 192 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 OR8J1Q8NGP2 316 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 LINC01560Q8TB33 94 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 TMEM163Q8TC26 289 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 TRUB1Q8WWH5 349 aaKnown RBP13.99□□□□□ -0.17
GPC1-207ENST00000466624 PTP4A1Q93096 173 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 SEC61A2Q9H9S3 476 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 HINT3Q9NQE9 182 aaKnown RBP13.99□□□□□ -0.17
GPC1-207ENST00000466624 POLE4Q9NR33 117 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 FAM118AQ9NWS6 357 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 MOKQ9UQ07 419 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 PTPN13Q12923 2485 aa13.99□□□□□ -0.17
GPC1-207ENST00000466624 LOC100130705A0A1B0GUX0 176 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 PRKYO43930 277 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 UBL3O95164 117 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 HRGP04196 525 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 CST2P09228 141 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 CRYGSP22914 178 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 CDAP32320 146 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 LSM6P62312 80 aaKnown RBP13.98□□□□□ -0.17
GPC1-207ENST00000466624 HSF2Q03933 536 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 SNTB1Q13884 538 aaKnown RBP13.98□□□□□ -0.17
GPC1-207ENST00000466624 C3orf36Q3SXR2 165 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 SLC35D3Q5M8T2 416 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 SEZ6L2Q6UXD5 910 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 CXXC5Q7LFL8 322 aaKnown RBP13.98□□□□□ -0.17
GPC1-207ENST00000466624 SKA3Q8IX90 412 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 ZNF555Q8NEP9 628 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 PROKR2Q8NFJ6 384 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 OR9Q1Q8NGQ5 310 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 OR52N5Q8NH56 324 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 KCNN2Q9H2S1 579 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 RERGLQ9H628 205 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 NGBQ9NPG2 151 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 B3GNT2Q9NY97 397 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 ZNF224Q9NZL3 707 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 CRIM1Q9NZV1 1036 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 GMPPBQ9Y5P6 360 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 PRR14LQ5THK1 2151 aa13.98□□□□□ -0.17
GPC1-207ENST00000466624 FAM183AA6NL82 134 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms