RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 OR5M8Q8NGP6 311 aa11.39□□□□□ -0.59
CLCNKA-204ENST00000464764 OR13C8Q8NGS7 320 aa11.39□□□□□ -0.59
CLCNKA-204ENST00000464764 MCHR2Q969V1 340 aa11.39□□□□□ -0.59
CLCNKA-204ENST00000464764 COMMD4Q9H0A8 199 aa11.39□□□□□ -0.59
CLCNKA-204ENST00000464764 TLNRD1Q9H1K6 362 aa11.39□□□□□ -0.59
CLCNKA-204ENST00000464764 GPN3Q9UHW5 284 aaPredicted RBP11.39□□□□□ -0.59
CLCNKA-204ENST00000464764 ATPIF1Q9UII2 106 aa11.39□□□□□ -0.59
CLCNKA-204ENST00000464764 TRIOO75962 3097 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 BCL2L11O43521 198 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 FGF19O95750 216 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 PLGP00747 810 aaPredicted RBP11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 GLAP06280 429 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ALOX5APP20292 161 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 GPR143P51810 404 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 RPS4XP62701 263 aaKnown RBP11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 PLEKHN1Q494U1 663 aaPredicted RBP11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 PAN3Q58A45 887 aaKnown RBP11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 MESTQ5EB52 335 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 RAB12Q6IQ22 244 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ENPP7Q6UWV6 458 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 CA13Q8N1Q1 262 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 BPIFB2Q8N4F0 458 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 OR51A2Q8NGJ7 313 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 OR1J4Q8NGS1 313 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 OR9A4Q8NGU2 314 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 CASTOR1Q8WTX7 329 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 OR1E3Q8WZA6 343 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ELOVL3Q9HB03 270 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 MSRAQ9UJ68 235 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 VSIG4Q9Y279 399 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 DENND4AQ7Z401 1863 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 TMEM235A6NFC5 223 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 TMEM200CA6NKL6 621 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 EEF1E1-BLOC1S5C9J1V9 151 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 CD14P08571 375 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ZNF735P0CB33 412 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 NFYBP25208 207 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ACTR1BP42025 376 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 PSMD4P55036 377 aaKnown RBP11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 SEC13P55735 322 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ACTR1AP61163 376 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ENPP2Q13822 863 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 ITPRIPL2Q3MIP1 535 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 GLYATL3Q5SZD4 288 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 CORO6Q6QEF8 472 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 KCTD9Q7L273 389 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 PM20D2Q8IYS1 436 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 SCPEP1Q9HB40 452 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 THAP10Q9P2Z0 257 aaPredicted RBP11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 TMED7Q9Y3B3 224 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 MRPS18BQ9Y676 258 aaKnown RBP11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 MYO9BQ13459 2157 aa11.38□□□□□ -0.59
CLCNKA-204ENST00000464764 TBC1D3DA0A087WVF3 549 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 TBC1D3IA0A087WXS9 549 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 PRSS38A1L453 326 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 GPR89AB7ZAQ6 455 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 TBC1D3LB9A6J9 549 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 SULT1C2O00338 296 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 FOXS1O43638 330 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 OR2T1O43869 369 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 SRPX2O60687 465 aaPredicted RBP11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 AK1P00568 194 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 TBC1D3HP0C7X1 549 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 GPR89BP0CG08 455 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 PVALBP20472 110 aaPredicted RBP11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 GRK6P43250 576 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 NPBWR1P48145 328 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 MEP1BQ16820 701 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 TBC1D3CQ6IPX1 549 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 ZCCHC12Q6PEW1 402 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 ZNF550Q7Z398 422 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 TBC1D3Q8IZP1 549 aaPredicted RBP11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 GVQW1Q8N7I0 195 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 OR5T2Q8NGG2 359 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 FAM174AQ8TBP5 190 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 ZBTB8AQ96BR9 441 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 CMBLQ96DG6 245 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 CYYR1Q96J86 154 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 C4orf45Q96LM5 186 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 LRFN5Q96NI6 719 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 LPAR4Q99677 370 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 COA4Q9NYJ1 87 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 COMMD9Q9P000 198 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 LOC100289279A0A1B0GTE1 492 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 A0A1B0GTI1 187 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 F8W036 122 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 CDC40O60508 579 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 WISP1O95388 367 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 CD8AP01732 235 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 HLA-DQA2P01906 255 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 DCNP07585 359 aaKnown RBP11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 AGTR1P30556 359 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 CASRP41180 1078 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 HOXA1P49639 335 aaPredicted RBP11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 BLOC1S1P78537 153 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 PPP1R1AQ13522 171 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 C1QL3Q5VWW1 255 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 OR52W1Q6IF63 320 aa11.37□□□□□ -0.59
CLCNKA-204ENST00000464764 TMPPEQ6ZT21 453 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms