RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TEAD2Q15562 447 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 HNRNPA1L2Q32P51 320 aaKnown RBP6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF528Q3MIS6 628 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 RNASE10Q5GAN6 216 aaKnown RBP6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 LY6G5CQ5SRR4 150 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF684Q5T5D7 378 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF425Q6IV72 752 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 MTFR2Q6P444 385 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 KCTD18Q6PI47 426 aaPredicted RBP6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ATRAIDQ6UW56 229 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 SSX6Q7RTT6 188 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 MAMDC2Q7Z304 686 aaPredicted RBP6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 TMED4Q7Z7H5 227 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 HMGN2P46Q86SG4 172 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ADGRE4PQ86SQ3 457 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 LDLRAD3Q86YD5 345 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 KDM8Q8N371 416 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 BPIFB2Q8N4F0 458 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 LMNTD1Q8N9Z9 388 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 DTWD2Q8NBA8 298 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 RELL2Q8NC24 303 aaPredicted RBP6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 NPEPL1Q8NDH3 523 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 SDR9C7Q8NEX9 313 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 OR52B4Q8NGK2 314 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ADAMTS18Q8TE60 1221 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 CYB5D2Q8WUJ1 264 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 TSEN15Q8WW01 171 aaKnown RBP6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 LIPHQ8WWY8 451 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 FAM3DQ96BQ1 224 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ZG16BQ96DA0 208 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 PIK3IP1Q96FE7 263 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ZC3H10Q96K80 434 aaKnown RBP6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ORAI3Q9BRQ5 295 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 VN1R3Q9BXE9 311 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 C1QTNF6Q9BXI9 259 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC17A9Q9BYT1 436 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 OR51M1Q9H341 326 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 OPA3Q9H6K4 179 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 WDR76Q9H967 626 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 CRIM1Q9NZV1 1036 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 PPP4R1LQ9P1A2 415 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 ASH2LQ9UBL3 628 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 IKZF2Q9UKS7 526 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 NTNG1Q9Y2I2 539 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 PLEKHM1Q9Y4G2 1056 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 HEATR5BQ9P2D3 2071 aa6.52□□□□□ -1.37
CLSTN1-204ENST00000464286 NUP210LQ5VU65 1888 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 LRRK1Q38SD2 2015 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 A0A087WUJ7 227 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 TRAV14DV4A0A0A6YYC5 116 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 A0A0G2JN53 185 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 IGLON5A6NGN9 336 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 OR4C45A6NMZ5 311 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 MFNGO00587 321 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 UBE2CO00762 179 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 FADS1O60427 444 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 DUS4LO95620 317 aaKnown RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 GPR75O95800 540 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 TXNDC12O95881 172 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 GYPBP06028 91 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 ERCC1P07992 297 aaPredicted RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 GSTP1P09211 210 aaKnown RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 SDHAP31040 664 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 GABRA3P34903 492 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 PSMB10P40306 273 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 PPICP45877 212 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 POU3F4P49335 361 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 CSNK1EP49674 416 aaKnown RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 RAB5CP51148 216 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 POLR2GP62487 172 aaKnown RBP eCLIP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 RAB1AP62820 205 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 NTHL1P78549 312 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 HTRA3P83110 453 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 TLE2Q04725 743 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 ECH1Q13011 328 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 DHRS2Q13268 280 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 KIR2DS3Q14952 304 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF141Q15928 474 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 UAP1L1Q3KQV9 507 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 ITPRIPL2Q3MIP1 535 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 TEX30Q5JUR7 227 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 DCAF12L2Q5VW00 463 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 LIPNQ5VXI9 398 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 FAM109BQ6ICB4 259 aaPredicted RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC39A5Q6ZMH5 540 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 HIST2H3AQ71DI3 136 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 OLIG3Q7RTU3 272 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 CDC20BQ86Y33 519 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 AMER3Q8N944 861 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 LINC01555Q8NAE3 123 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 RCBTB1Q8NDN9 531 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 OR1S2Q8NGQ3 325 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 OR2G2Q8NGZ5 317 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 GRHL3Q8TE85 626 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 PPP1R1CQ8WVI7 109 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 NUDCD2Q8WVJ2 157 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 ZFPM2Q8WW38 1151 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 SUSD6Q92537 303 aa6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 HOXB13Q92826 284 aaPredicted RBP6.51□□□□□ -1.37
CLSTN1-204ENST00000464286 MCHR2Q969V1 340 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms