RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 MSANTD1Q6ZTZ1 278 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 C9orf139Q6ZV77 190 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 JAZF1Q86VZ6 243 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 LRRC28Q86X40 367 aaPredicted RBP12.2□□□□□ -0.46
SMC1A-204ENST00000463684 C1orf174Q8IYL3 243 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 PARP8Q8N3A8 854 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 SLC25A40Q8TBP6 338 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 KLF14Q8TD94 323 aaPredicted RBP12.2□□□□□ -0.46
SMC1A-204ENST00000463684 WFDC12Q8WWY7 111 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 UBE2FQ969M7 185 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 WDR55Q9H6Y2 383 aaPredicted RBP12.2□□□□□ -0.46
SMC1A-204ENST00000463684 CCNB1IP1Q9NPC3 277 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 TMEM106BQ9NUM4 274 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 WNK2Q9Y3S1 2297 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 C5orf49A4QMS7 147 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 PRORSD1PA6NEY8 169 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 TRPC5OSA6NMA1 111 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 HOXA3O43365 443 aaPredicted RBP12.19□□□□□ -0.46
SMC1A-204ENST00000463684 TPST1O60507 370 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 IGHG1P01857 330 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 CD55P08174 381 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 PGA4P0DJD7 388 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 PGA3P0DJD8 388 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 PPIAL4GP0DN37 164 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 IGHV4-38-2P0DP08 117 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 EPHA3P29320 983 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 SEC61A1P61619 476 aaKnown RBP12.19□□□□□ -0.46
SMC1A-204ENST00000463684 PABPC1L2AQ5JQF8 200 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 OLFML2AQ68BL7 652 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 NXNQ6DKJ4 435 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 REEP3Q6NUK4 255 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 BTNL3Q6UXE8 466 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 COMTD1Q86VU5 262 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 RANBP3LQ86VV4 465 aaPredicted RBP12.19□□□□□ -0.46
SMC1A-204ENST00000463684 BHLHE22Q8NFJ8 381 aaPredicted RBP12.19□□□□□ -0.46
SMC1A-204ENST00000463684 NFKBIDQ8NI38 313 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 MCHR2Q969V1 340 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 ZDHHC16Q969W1 377 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 RSPO3Q9BXY4 272 aaPredicted RBP12.19□□□□□ -0.46
SMC1A-204ENST00000463684 OR2J1Q9GZK6 312 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 NANOGQ9H9S0 305 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 TAS2R5Q9NYW4 299 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 IL20RAQ9UHF4 553 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 TRIM33Q9UPN9 1127 aa12.19□□□□□ -0.46
SMC1A-204ENST00000463684 PRKDCP78527 4128 aaKnown RBP12.18□□□□□ -0.46
SMC1A-204ENST00000463684 FAM181BA6NEQ2 426 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 A8MXK9 166 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 CH25HO95992 272 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 MMP7P09237 267 aaPredicted RBP12.18□□□□□ -0.46
SMC1A-204ENST00000463684 BMP2P12643 396 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 TNFRSF1AP19438 455 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 BGNP21810 368 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 TNFSF4P23510 183 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 CD80P33681 288 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 GDI2P50395 445 aaKnown RBP12.18□□□□□ -0.46
SMC1A-204ENST00000463684 RAG2P55895 527 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 BTG1P62324 171 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 HHATQ5VTY9 493 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 LRRN1Q6UXK5 716 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 ZNF101Q8IZC7 436 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 ZNF607Q96SK3 696 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 CITED1Q99966 193 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 EVA1AQ9H8M9 152 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 SIAEQ9HAT2 523 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 MSL2Q9HCI7 577 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 NANSQ9NR45 359 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 DCAF16Q9NXF7 216 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 KLHL21Q9UJP4 597 aa12.18□□□□□ -0.46
SMC1A-204ENST00000463684 SOX21Q9Y651 276 aaPredicted RBP12.18□□□□□ -0.46
SMC1A-204ENST00000463684 ARHGAP32A7KAX9 2087 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 H3BSA7 217 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 TIMM8AO60220 97 aaPredicted RBP12.17□□□□□ -0.46
SMC1A-204ENST00000463684 TGDSO95455 350 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 PLATP00750 562 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 WNT5AP41221 380 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 POLR2JP52435 117 aaKnown RBP12.17□□□□□ -0.46
SMC1A-204ENST00000463684 PPP1CBP62140 327 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 CDK6Q00534 326 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 ZNF74Q16587 644 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 HIST3H3Q16695 136 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 SPRNQ5BIV9 151 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 TMEM255AQ5JRV8 349 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 GCNT6Q5T4J0 391 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 TTC33Q6PID6 262 aaPredicted RBP12.17□□□□□ -0.46
SMC1A-204ENST00000463684 ZER1Q7Z7L7 766 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 ABHD4Q8TB40 342 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 POM121L2Q96KW2 1035 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 SAMD8Q96LT4 415 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 ZNF347Q96SE7 839 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 SLC30A2Q9BRI3 323 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 ZIM2Q9NZV7 527 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 LRCH1Q9Y2L9 728 aa12.17□□□□□ -0.46
SMC1A-204ENST00000463684 LOC100509620A0A075B734 347 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 MDFIC2A0A1B0GVS7 189 aa12.16□□□□□ -0.46
SMC1A-204ENST00000463684 CLPSL1A2RUU4 121 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms