RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 IGHV1-46P01743 117 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 TSPAN19P0C672 248 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 DRD4P21917 467 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 CBLP22681 906 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 APLNRP35414 380 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 ZNF718Q3SXZ3 478 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 ARMCX4Q5H9R4 360 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 C10orf111Q8N326 155 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 FNDC8Q8TC99 324 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 ST7LQ8TDW4 575 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 LIPHQ8WWY8 451 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 MARS2Q96GW9 593 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 POLR2J2Q9GZM3 115 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 POLR2J3Q9H1A7 115 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 SIAEQ9HAT2 523 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 VAPAQ9P0L0 249 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 NUP50Q9UKX7 468 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 PCDHGB1Q9Y5G3 927 aa12.33□□□□□ -0.44
DNMT3A-207ENST00000461228 A0A0G2JK05 382 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 TRAPPC13A5PLN9 417 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 DNAJC9-AS1A6NH13 148 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 RNF13O43567 381 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 RGS9O75916 674 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 LYPD3O95274 346 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 FSTL3O95633 263 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 IGHV2-70P01814 119 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 ZNF12P17014 697 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 GCH1P30793 250 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 RBM34P42696 430 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 TREML4Q6UXN2 200 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 NANOGNBQ7Z5D8 188 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 ZER1Q7Z7L7 766 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 C10orf53Q8N6V4 93 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 C11orf65Q8NCR3 313 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 OR1J1Q8NGS3 322 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 ADAMTS16Q8TE57 1224 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 RASSF5Q8WWW0 418 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 MCHR2Q969V1 340 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 NMD3Q96D46 503 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 SPDL1Q96EA4 605 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 POM121L2Q96KW2 1035 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 C7orf26Q96N11 449 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 SH3GL3Q99963 347 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 WACQ9BTA9 647 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 KCNK9Q9NPC2 374 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 MMP24Q9Y5R2 645 aa12.32□□□□□ -0.44
DNMT3A-207ENST00000461228 DOCK11Q5JSL3 2073 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 HTR3EA5X5Y0 456 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 EVPLLA8MZ36 301 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 F5H0A9 414 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 POLR3GO15318 223 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 SERPINI2O75830 405 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 QDPRP09417 244 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 PATE4P0C8F1 98 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 STOMP27105 288 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 CLRN1P58418 232 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 HSF2Q03933 536 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 TAF11Q15544 211 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 CEP85LQ5SZL2 805 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 TTC33Q6PID6 262 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 EPGNQ6UW88 154 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 FUNDC1Q8IVP5 155 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 ZNF101Q8IZC7 436 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 ZNF283Q8N7M2 679 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 NPEPL1Q8NDH3 523 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 VANGL1Q8TAA9 524 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 ASB10Q8WXI3 467 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 SLC25A28Q96A46 364 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 NABP1Q96AH0 204 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 C1orf147Q96MC9 270 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 MCHR1Q99705 422 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 CPPED1Q9BRF8 314 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 KCNN2Q9H2S1 579 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 IKZF5Q9H5V7 419 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 RNF121Q9H920 327 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 IL20RAQ9UHF4 553 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 LEF1Q9UJU2 399 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 LRCH1Q9Y2L9 728 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 CACNG2Q9Y698 323 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 WNK1Q9H4A3 2382 aa12.31□□□□□ -0.44
DNMT3A-207ENST00000461228 A0A1B0GUS0 222 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 A0A1W2PRG6 482 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 ZSCAN5BA6NJL1 495 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 J3QW42 95 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 IFNL4K9M1U5 179 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 TPD52L2O43399 206 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 KITP10721 976 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 MAKP20794 623 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 WNT5AP41221 380 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 ZNF154Q13106 437 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 MELKQ14680 651 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 NPTX1Q15818 432 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 ALKBH6Q3KRA9 238 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 PABPC1L2AQ5JQF8 200 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 ENTPD8Q5MY95 495 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 FAM205BPQ63HN1 556 aa12.3□□□□□ -0.44
DNMT3A-207ENST00000461228 FOXL2NBQ6ZUU3 175 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms