RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 NPIPA1Q9UND3 350 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 B3GNT3Q9Y2A9 372 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 CFAP46Q8IYW2 2715 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 ZAR1LA6NP61 321 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 KDM4EB2RXH2 506 aaPredicted RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 E9PQ18 207 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TFECO14948 347 aaPredicted RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 ZNF208O43345 1280 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TPOP07202 933 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 BMP7P18075 431 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 POU3F2P20265 443 aaPredicted RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 GSTM3P21266 225 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 SELENBP1Q13228 472 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 FAM69AQ5T7M9 428 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 STEAP3Q658P3 488 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 LAIR2Q6ISS4 152 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 PYHIN1Q6K0P9 492 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TIGD4Q8IY51 512 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 CLDN22Q8N7P3 220 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 ZNF555Q8NEP9 628 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 THRSPQ92748 146 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 HRASLS5Q96KN8 279 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 IFT27Q9BW83 186 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 SLC19A3Q9BZV2 496 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TINAGL1Q9GZM7 467 aaPredicted RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 RACGAP1Q9H0H5 632 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 HHATLQ9HCP6 504 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 ZNF226Q9NYT6 803 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 RAB26Q9ULW5 256 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 PCDHB10Q9UN67 800 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 RNF24Q9Y225 148 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 CDH10Q9Y6N8 788 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 ZNF407Q9C0G0 2248 aa9.21□□□□□ -0.93
USP39-210ENST00000459775 KALRNO60229 2985 aa9.21□□□□□ -0.93
USP39-210ENST00000459775 TLN1Q9Y490 2541 aaKnown RBP9.21□□□□□ -0.93
USP39-210ENST00000459775 A0A1W2PRV1 198 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 MAGEA13PA6NCF6 341 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 LINC00587B1AMM8 73 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 PRR23D1E9PI22 279 aaPredicted RBP9.21□□□□□ -0.94
USP39-210ENST00000459775 SULT2B1O00204 365 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 WRBO00258 174 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 SLC16A6O15403 523 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 PRKYO43930 277 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 OR4E1P0C645 316 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 PRR23D2P0DMB1 279 aaPredicted RBP9.21□□□□□ -0.94
USP39-210ENST00000459775 ADORA3P0DMS8 318 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 G0S2P27469 103 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 ADH6P28332 368 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 RPL4P36578 427 aaKnown RBP9.21□□□□□ -0.94
USP39-210ENST00000459775 CAPZA2P47755 286 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 LHX2P50458 406 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 BCAP31P51572 246 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 VAMP2P63027 116 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 CDK5Q00535 292 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 IL5RAQ01344 420 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 CD47Q08722 323 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 TOP3AQ13472 1001 aaPredicted RBP9.21□□□□□ -0.94
USP39-210ENST00000459775 KCNJ8Q15842 424 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 RFX4Q33E94 735 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 PCGF3Q3KNV8 242 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 LCN1P1Q5VSP4 162 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 ENTHD1Q8IYW4 607 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 FAM109AQ8N4B1 249 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 Q8NA96 180 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 OR13C3Q8NGS6 347 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 STK35Q8TDR2 534 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 ROBO4Q8WZ75 1007 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 TM9SF4Q92544 642 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 RHNO1Q9BSD3 238 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 PARD6GQ9BYG4 376 aaPredicted RBP9.21□□□□□ -0.94
USP39-210ENST00000459775 POTEKPQ9BYX7 375 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 LDAHQ9H6V9 325 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 EXO5Q9H790 373 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 ZDHHC11Q9H8X9 412 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 AMBNQ9NP70 447 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 KLHL13Q9P2N7 655 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 TUBD1Q9UJT1 453 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 RNF6Q9Y252 685 aa9.21□□□□□ -0.94
USP39-210ENST00000459775 CLEC18AA5D8T8 446 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 FAM183AA6NL82 134 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 MS4A18H0YCH9 400 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 BHLHE40O14503 412 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 SMAD9O15198 467 aaKnown RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 CXCL13O43927 109 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 RHBDL1O75783 438 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 CLPXO76031 633 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 TGM6O95932 706 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 FMO3P31513 532 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 UQCRC1P31930 480 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 GGT2P36268 569 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 EIF1AXP47813 144 aaKnown RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 NUP107P57740 925 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ISL1P61371 349 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ESRRGP62508 458 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 RPS4XP62701 263 aaKnown RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 PDK3Q15120 406 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 TIGD6Q17RP2 521 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 HYAL4Q2M3T9 481 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 MS4A18Q3C1V0 323 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 PXDC1Q5TGL8 231 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms