RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 KLHL22Q53GT1 634 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 SLC35D3Q5M8T2 416 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 ZNF324BQ6AW86 544 aaPredicted RBP7.72□□□□□ -1.17
RIF1-208ENST00000457745 TMEM225Q6GV28 225 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 NCCRP1Q6ZVX7 275 aaPredicted RBP7.72□□□□□ -1.17
RIF1-208ENST00000457745 SPATC1Q76KD6 591 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 DPY19L4Q7Z388 723 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 ADGRE4PQ86SQ3 457 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 KLBQ86Z14 1044 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 TUSC5Q8IXB3 177 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 SVOPQ8N4V2 548 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 ACBD7Q8N6N7 88 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 OR5M9Q8NGP3 310 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 OR13C5Q8NGS8 318 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 OR6N2Q8NGY6 317 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 OR2T4Q8NH00 348 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 FGFBP3Q8TAT2 258 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 RGP1Q92546 391 aaPredicted RBP7.72□□□□□ -1.17
RIF1-208ENST00000457745 RORBQ92753 470 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 RFKQ969G6 155 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 MCHR2Q969V1 340 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 PPP1R14AQ96A00 147 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 NABP1Q96AH0 204 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 C12orf43Q96C57 262 aaKnown RBP7.72□□□□□ -1.17
RIF1-208ENST00000457745 MGLLQ99685 303 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 DOK1Q99704 481 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 BATF3Q9NR55 127 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 ACOXLQ9NUZ1 547 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 SLCO1C1Q9NYB5 712 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 H2AFY2Q9P0M6 372 aaPredicted RBP7.72□□□□□ -1.17
RIF1-208ENST00000457745 MRM2Q9UI43 246 aaKnown RBP7.72□□□□□ -1.17
RIF1-208ENST00000457745 ST6GALNAC2Q9UJ37 374 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 ENPP5Q9UJA9 477 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 CAMK2AQ9UQM7 478 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 EXOSC1Q9Y3B2 195 aaKnown RBP7.72□□□□□ -1.17
RIF1-208ENST00000457745 CACNA1CQ13936 2221 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 GTF3C1Q12789 2109 aa7.72□□□□□ -1.17
RIF1-208ENST00000457745 ATRXP46100 2492 aa7.71□□□□□ -1.17
RIF1-208ENST00000457745 IGKV3D-15A0A087WSY6 115 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 SMIM31A0A1B0GVY4 71 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 A0A1W2PPW3 197 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 DAPL1A0PJW8 107 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ZNF503-AS2A6NEH8 195 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 TRIM64BA6NI03 449 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 A6NIZ1 184 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 MKRN2OSH3BPM6 223 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 M0R3G1 203 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ACOT7O00154 380 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 XKRYO14609 159 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 DOK2O60496 412 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 GABARAPO95166 117 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ACTL6AO96019 429 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 QDPRP09417 244 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 SPARCP09486 303 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 CPN1P15169 458 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 CD36P16671 472 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ZNF43P17038 809 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ALOX5APP20292 161 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 MAGEB1P43366 347 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 CENPAP49450 140 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 RGS6P49758 472 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ZNF133P52736 654 aaPredicted RBP7.71□□□□□ -1.18
RIF1-208ENST00000457745 WNT4P56705 351 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 RAP1BP61224 184 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 RAP1AP62834 184 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 MFGE8Q08431 387 aaPredicted RBP7.71□□□□□ -1.18
RIF1-208ENST00000457745 RASGEF1BQ0VAM2 473 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 TMED1Q13445 227 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ENDOGQ14249 297 aaKnown RBP7.71□□□□□ -1.18
RIF1-208ENST00000457745 GALEQ14376 348 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 BCL2A1Q16548 175 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 CDONQ4KMG0 1287 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 TSPO2Q5TGU0 170 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 LIPKQ5VXJ0 399 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 RTL6Q6ICC9 239 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 CFAP77Q6ZQR2 320 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 FOXL2NBQ6ZUU3 175 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 SLC16A9Q7RTY1 509 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 PHC2Q8IXK0 858 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 C20orf196Q8IYI0 205 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 C9orf106Q8NAJ2 232 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 C9orf43Q8TAL5 461 aaPredicted RBP7.71□□□□□ -1.18
RIF1-208ENST00000457745 NDNFQ8TB73 568 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ST7LQ8TDW4 575 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 PELI1Q96FA3 418 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 SLC25A44Q96H78 314 aaPredicted RBP7.71□□□□□ -1.18
RIF1-208ENST00000457745 POM121Q96HA1 1249 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 MAP6Q96JE9 813 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 C4orf36Q96KX1 117 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 ALKBH3Q96Q83 286 aaPredicted RBP7.71□□□□□ -1.18
RIF1-208ENST00000457745 NAA11Q9BSU3 229 aaPredicted RBP7.71□□□□□ -1.18
RIF1-208ENST00000457745 CENPOQ9BU64 300 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 TEX12Q9BXU0 123 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 PRDM14Q9GZV8 571 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 PPIL3Q9H2H8 161 aaKnown RBP7.71□□□□□ -1.18
RIF1-208ENST00000457745 LDAHQ9H6V9 325 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 EXO5Q9H790 373 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 NOX3Q9HBY0 568 aa7.71□□□□□ -1.18
RIF1-208ENST00000457745 PRSS50Q9UI38 385 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms