RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 CSNK2A1P68400 391 aaPredicted RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 TCEAL6Q6IPX3 200 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 DND1Q8IYX4 353 aaKnown RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 STEAP2Q8NFT2 490 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 AUNIPQ9H7T9 357 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 NUP50Q9UKX7 468 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 B9D1Q9UPM9 204 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 EEF1E1-BLOC1S5C9J1V9 151 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 ZFPL1O95159 310 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 IL5P05113 134 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 RPS4Y1P22090 263 aaKnown RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 CSNK1A1P48729 337 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 SUMO3P55854 103 aaPredicted RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 ZNF546Q86UE3 836 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 NECAB3Q96P71 396 aaPredicted RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 APMAPQ9HDC9 416 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 MYEF2Q9P2K5 600 aaKnown RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 NXT1Q9UKK6 140 aaKnown RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 HLA-AP01891 365 aaKnown RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 EVI2BP34910 448 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 GPR85P60893 370 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 FUT7Q11130 342 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 PRTGQ2VWP7 1150 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 OTOSQ8NHW6 89 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 SLC25A43Q8WUT9 341 aaPredicted RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 PHF7Q9BWX1 381 aaPredicted RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 SLC17A5Q9NRA2 495 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 ZNF701Q9NV72 531 aaPredicted RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 ALOX12BO75342 701 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 CRTAPO75718 401 aaPredicted RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 ZGLP1P0C6A0 271 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 LSSP48449 732 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 KCNAB1Q14722 419 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 TMEM164Q5U3C3 297 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 LYSMD4Q5XG99 296 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 DCXRQ7Z4W1 244 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 RABEPKQ7Z6M1 372 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 ACBD4Q8NC06 268 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 MED30Q96HR3 178 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 TRAF4Q9BUZ4 470 aaPredicted RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 GSKIPQ9P0R6 139 aa12.78□□□□□ -0.36
SYT1-204ENST00000457153 RBM7Q9Y580 266 aaKnown RBP12.78□□□□□ -0.36
SYT1-204ENST00000457153 PDGFAP04085 211 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 TPOP07202 933 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 BIDP55957 195 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 SQSTM1Q13501 440 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 PLPP7Q8NBV4 271 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 KCNG3Q8TAE7 436 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 YIPF5Q969M3 257 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 DDOQ99489 341 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 VRK1Q99986 396 aaPredicted RBP12.77□□□□□ -0.36
SYT1-204ENST00000457153 WDR77Q9BQA1 342 aaPredicted RBP12.77□□□□□ -0.36
SYT1-204ENST00000457153 CHST11Q9NPF2 352 aa12.77□□□□□ -0.36
SYT1-204ENST00000457153 GGT3PA6NGU5 568 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 TUBAL3A6NHL2 446 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 TMEM200CA6NKL6 621 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 SPDEFO95238 335 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 CD63P08962 238 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 DLSTP36957 453 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 PGAP1Q75T13 922 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 NPEPL1Q8NDH3 523 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 ZNF680Q8NEM1 530 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 WWTR1Q9GZV5 400 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 UCK1Q9HA47 277 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 FRMPD3Q5JV73 1810 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 TRAPPC6AO75865 159 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 CHRM2P08172 466 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 GPR3P46089 330 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 SLC35A1P78382 337 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 GGTLC2Q14390 218 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 TRAPPC6BQ86SZ2 158 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 OR52N5Q8NH56 324 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 HPF1Q9NWY4 346 aa12.77□□□□□ -0.37
SYT1-204ENST00000457153 TEX46H3BTG2 121 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 SLC17A2O00624 439 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 AKR7A2O43488 359 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 RGS11O94810 467 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 HLA-DQB1P01920 261 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 P04436 131 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 ACAA2P42765 397 aaKnown RBP12.76□□□□□ -0.37
SYT1-204ENST00000457153 HERV-K104P61576 105 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 TOMM34Q15785 309 aaPredicted RBP12.76□□□□□ -0.37
SYT1-204ENST00000457153 VWA2Q5GFL6 755 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 COL13A1Q5TAT6 717 aaPredicted RBP12.76□□□□□ -0.37
SYT1-204ENST00000457153 SLC51BQ86UW2 128 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 CSNK2A3Q8NEV1 391 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 OR56B1Q8NGI3 324 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 OR51T1Q8NGJ9 327 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 KTI12Q96EK9 354 aaPredicted RBP12.76□□□□□ -0.37
SYT1-204ENST00000457153 MOB1AQ9H8S9 216 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 KCNG2Q9UJ96 466 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 FOXJ3Q9UPW0 622 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 RPH3AQ9Y2J0 694 aaPredicted RBP12.76□□□□□ -0.37
SYT1-204ENST00000457153 KRBOX1C9JBD0 128 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 GLB1P16278 677 aa12.76□□□□□ -0.37
SYT1-204ENST00000457153 ANXA7P20073 488 aaKnown RBP12.76□□□□□ -0.37
SYT1-204ENST00000457153 PVALBP20472 110 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms