RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PYURFQ96I23 114 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 CCT8L2Q96SF2 557 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 PIMREGQ9BSJ6 248 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 SIAEQ9HAT2 523 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 GRHPRQ9UBQ7 328 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 UGT2A1Q9Y4X1 527 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 IGKV1D-43A0A0B4J1Z2 117 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 A0A1W2PPL8 197 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 MGRN1O60291 552 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 GLRXP35754 106 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 GUCA1AP43080 201 aaPredicted RBP13.99□□□□□ -0.17
CPSF6-203ENST00000456847 KRTAP1-1Q07627 177 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 THEM4Q5T1C6 240 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 SLC25A47Q6Q0C1 308 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 OR1J2Q8NGS2 313 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 NMD3Q96D46 503 aaKnown RBP13.99□□□□□ -0.17
CPSF6-203ENST00000456847 C7orf34Q96L11 122 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 ZNF570Q96NI8 536 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 DOK1Q99704 481 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 SYT3Q9BQG1 590 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 MRPL37Q9BZE1 423 aaKnown RBP13.99□□□□□ -0.17
CPSF6-203ENST00000456847 LRMDAQ9H2I8 198 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 OR51B6Q9H340 312 aa13.99□□□□□ -0.17
CPSF6-203ENST00000456847 MYOZ1Q9NP98 299 aaPredicted RBP13.99□□□□□ -0.17
CPSF6-203ENST00000456847 TRBV4-1A0A0J9YWV2 114 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 H7C1C5 153 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 XKRYO14609 159 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 FAM157BP0CG42 384 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 CCL2P13500 99 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 APLNRP35414 380 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 MNAT1P51948 309 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 LCN6P62502 163 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 FHL1Q13642 323 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 ARIH2OSQ8N7S6 290 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 RSRC1Q96IZ7 334 aaKnown RBP13.98□□□□□ -0.17
CPSF6-203ENST00000456847 CD300AQ9UGN4 299 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 FZR1Q9UM11 496 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 ADAM18Q9Y3Q7 739 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 TMEM129A0AVI4 362 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 SLC22A23A1A5C7 686 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 M0R233 179 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 NDUFB2O95178 105 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 GADD45GO95257 159 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 CD14P08571 375 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 ADRA2AP08913 450 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 SMIM11AP58511 58 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 FXNQ16595 210 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 RGS7BPQ6MZT1 257 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-203ENST00000456847 ICA1LQ8NDH6 482 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 NEU4Q8WWR8 484 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-203ENST00000456847 NABP1Q96AH0 204 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 TPK1Q9H3S4 243 aa13.98□□□□□ -0.17
CPSF6-203ENST00000456847 CHD3Q12873 2000 aaKnown RBP13.97□□□□□ -0.17
CPSF6-203ENST00000456847 A0A1W2PPW3 197 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 CD5LO43866 347 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 FABP3P05413 133 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 MMP7P09237 267 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-203ENST00000456847 ZNF32P17041 273 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 CCNOP22674 350 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 APEX1P27695 318 aaKnown RBP13.97□□□□□ -0.17
CPSF6-203ENST00000456847 LOXL1Q08397 574 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-203ENST00000456847 GGTLC2Q14390 218 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 MSMPQ1L6U9 139 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 PABPC1L2AQ5JQF8 200 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 ZCCHC24Q8N2G6 241 aaKnown RBP13.97□□□□□ -0.17
CPSF6-203ENST00000456847 PAQR4Q8N4S7 273 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-203ENST00000456847 CCDC197Q8NCU1 140 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 Q96M85 177 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 YAE1D1Q9NRH1 226 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 DUSP13Q9UII6 198 aa13.97□□□□□ -0.17
CPSF6-203ENST00000456847 NDUFS8O00217 210 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 SYNGR3O43761 229 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 FAM107AO95990 144 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 SEMG1P04279 462 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 LCKP06239 509 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 OMPP47874 163 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 LIMS1P48059 325 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 EVX1P49640 407 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 KRR1Q13601 381 aaKnown RBP13.96□□□□□ -0.17
CPSF6-203ENST00000456847 SEC23BQ15437 767 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 SPATS1Q496A3 300 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 FITM2Q8N6M3 262 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 DHRS1Q96LJ7 313 aa13.96□□□□□ -0.17
CPSF6-203ENST00000456847 A0A096LNT2 108 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 TEX13CA0A0J9YWL9 993 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 LOC390937A0A1W2PQ73 354 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 UNC119BA6NIH7 251 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 B2RBV5 119 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 DAOP14920 347 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 USF1P22415 310 aaPredicted RBP13.96□□□□□ -0.18
CPSF6-203ENST00000456847 LAP3P28838 519 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 ALDH3B1P43353 468 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 TMEM249Q2WGJ8 235 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 KRTAP21-3Q3LHN1 58 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 MESTQ5EB52 335 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 LRP11Q86VZ4 500 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 AKR7LQ8NHP1 331 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 RASD2Q96D21 266 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 NSL1Q96IY1 281 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 REV1Q9UBZ9 1251 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms