RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LPCAT3Q6P1A2 487 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 C5orf46Q6UWT4 87 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ADAMTSL4Q6UY14 1074 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 LRRC69Q6ZNQ3 347 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 DPY19L4Q7Z388 723 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 FAM219AQ8IW50 185 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 BAP18Q8IXM2 172 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CDRT4Q8N9R6 151 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 TMEM229BQ8NBD8 167 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 TMEM52Q8NDY8 209 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ELOA3Q8NG57 546 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CD99L2Q8TCZ2 262 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 GPR148Q8TDV2 347 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 RNF141Q8WVD5 230 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 MCHR2Q969V1 340 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 MRGPRFQ96AM1 343 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 RRNAD1Q96FB5 475 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 LRFN5Q96NI6 719 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 NRIP2Q9BQI9 281 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 NAA11Q9BSU3 229 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 EDEM2Q9BV94 578 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 WDR76Q9H967 626 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 DUSP22Q9NRW4 184 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 RCC2Q9P258 522 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 GHRLQ9UBU3 117 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 YBX2Q9Y2T7 364 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CSAG2Q9Y5P2 127 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 DOCK9Q9BZ29 2069 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 C13orf42A0A1B0GVH6 325 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 FGF17O60258 216 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CYB5AP00167 134 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 RD3LP0DJH9 198 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 TPT1P13693 172 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ZBTB25P24278 435 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ABCD3P28288 659 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 P2RY2P41231 377 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 IL13RA1P78552 427 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 AIMP2Q13155 320 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 SMCO1Q147U7 214 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 RAB11BQ15907 218 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CORO6Q6QEF8 472 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 SLC16A9Q7RTY1 509 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 PRSS41Q7RTY9 318 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF761Q86XN6 746 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 SKA3Q8IX90 412 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF595Q8IYB9 648 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 OR4K17Q8NGC6 315 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 TSEN15Q8WW01 171 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 C3orf49Q96BT1 292 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 C14orf79Q96F83 325 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ZC3H10Q96K80 434 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CLCC1Q96S66 551 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 AMELYQ99218 206 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 LAT2Q9GZY6 243 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 COMMD4Q9H0A8 199 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 MKKSQ9NPJ1 570 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 MMP26Q9NRE1 261 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 LAMP5Q9UJQ1 280 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 KLK13Q9UKR3 277 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 A0A1W2PPC1 479 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 TMEM235A6NFC5 223 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 EFCAB7A8K855 629 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 C9JQL5 133 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 F8VVB4 439 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 F8VWA3 439 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 AGPAT2O15120 278 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 ARPC3O15145 178 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 P2RX6O15547 441 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 MOSPD3O75425 235 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 IGKV1D-16P01601 117 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 S100A6P06703 90 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 SFTA3P0C7M3 94 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 VAMP1P23763 118 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 PTAFRP25105 342 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 KIR3DL2P43630 455 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 F2RL1P55085 397 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 SCAND1P57086 179 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 SKP1P63208 163 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 SLC22A6Q4U2R8 563 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 EXOSC6Q5RKV6 272 aaKnown RBP9.32□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF425Q6IV72 752 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 ULK3Q6PHR2 472 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 RNF44Q7L0R7 432 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 TMEM200AQ86VY9 491 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 BHLHE23Q8NDY6 225 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 SLC30A7Q8NEW0 376 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 OR4E2Q8NGC2 313 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 OR6N2Q8NGY6 317 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 STOML3Q8TAV4 291 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 ROBO4Q8WZ75 1007 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 OR8D1Q8WZ84 308 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 DCUN1D4Q92564 292 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 GAL3ST3Q96A11 431 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 TRIM43Q96BQ3 446 aaPredicted RBP9.32□□□□□ -0.92
CLIP4-208ENST00000456385 LRRC3BQ96PB8 259 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 SPSB2Q99619 263 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 TRIM2Q9C040 744 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 RHOFQ9HBH0 211 aa9.32□□□□□ -0.92
CLIP4-208ENST00000456385 CYTL1Q9NRR1 136 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms