RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 C20orf196Q8IYI0 205 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 RNF128Q8TEB7 428 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 SNX33Q8WV41 574 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 ROBO4Q8WZ75 1007 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 PNPLA2Q96AD5 504 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 TMEM45BQ96B21 275 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 PELI1Q96FA3 418 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 WDYHV1Q96HA8 205 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 TSC22D3Q99576 134 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 COQ7Q99807 217 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 CHCHD6Q9BRQ6 235 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 RNF122Q9H9V4 155 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 PLSCR2Q9NRY7 297 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 GLTPQ9NZD2 209 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 ST6GALNAC2Q9UJ37 374 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 LAMP5Q9UJQ1 280 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 UGT2A1Q9Y4X1 527 aa14.33□□□□□ -0.11
TMEM220-202ENST00000455996 KIAA1549Q9HCM3 1950 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 METTL15A6NJ78 407 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 MKRN2OSH3BPM6 223 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 HLA-DQA2P01906 255 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 PDGFAP04085 211 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 LAP3P28838 519 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 CSNK1A1P48729 337 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 GBX2P52951 348 aaPredicted RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 SH3BGRP55822 239 aaPredicted RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 LSM3P62310 102 aaKnown RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 ROM1Q03395 351 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 LSAMPQ13449 338 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 CCDC58Q4VC31 144 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 DMKNQ6E0U4 476 aaPredicted RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 SLC18B1Q6NT16 456 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 RPUSD3Q6P087 351 aaKnown RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 SIAH3Q8IW03 269 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 RNF166Q96A37 237 aaPredicted RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 CENPOQ9BU64 300 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 LDAHQ9H6V9 325 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 MRM2Q9UI43 246 aaKnown RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 KCNG2Q9UJ96 466 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 CELSR3Q9NYQ7 3312 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 ASPMQ8IZT6 3477 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 TRDV1A0A1B0GX56 115 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 GPR171O14626 319 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 SYNGR4O95473 234 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 ADRB1P08588 477 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 QDPRP09417 244 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 TACSTD2P09758 323 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 ZNF182P17025 639 aaPredicted RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 CELP19835 753 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 FGF9P31371 208 aaPredicted RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 UCNP55089 124 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 RPS25P62851 125 aaKnown RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 TUBA1BP68363 451 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 ADAM8P78325 824 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 SRYQ05066 204 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 RASGEF1BQ0VAM2 473 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 INAQ16352 499 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 CARD17Q5XLA6 110 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 USP43Q70EL4 1123 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 TUBA1AQ71U36 451 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 ZFP41Q8N8Y5 198 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 NDNFQ8TB73 568 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 DYNC2LI1Q8TCX1 351 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 SNRNP27Q8WVK2 155 aaKnown RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 C11orf40Q8WZ69 217 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 TRMT61AQ96FX7 289 aaKnown RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 DACH2Q96NX9 599 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 DCUN1D5Q9BTE7 237 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 PRDM14Q9GZV8 571 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 SIAEQ9HAT2 523 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 GNG8Q9UK08 70 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 MCTS1Q9ULC4 181 aaKnown RBP14.32□□□□□ -0.12
TMEM220-202ENST00000455996 SSR3Q9UNL2 185 aa14.32□□□□□ -0.12
TMEM220-202ENST00000455996 ZFHX4Q86UP3 3567 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 LOC100506127A0A0U1RQW1 187 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 ZNF724A8MTY0 619 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 AQP7O14520 342 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 MAGEB4O15481 346 aaPredicted RBP14.31□□□□□ -0.12
TMEM220-202ENST00000455996 SLC43A1O75387 559 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 UPK3AO75631 287 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 MPZL1O95297 269 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 ZNF823P16415 610 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 NTF4P34130 210 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 SELENOPP49908 381 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 SIRPAP78324 504 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 CDK5R1Q15078 307 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 TRAM1Q15629 374 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 TBR1Q16650 682 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 MEP1BQ16820 701 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 SOWAHCQ53LP3 525 aaPredicted RBP14.31□□□□□ -0.12
TMEM220-202ENST00000455996 RPL22L1Q6P5R6 122 aaKnown RBP14.31□□□□□ -0.12
TMEM220-202ENST00000455996 RBMXL3Q8N7X1 1067 aaKnown RBP14.31□□□□□ -0.12
TMEM220-202ENST00000455996 KBTBD8Q8NFY9 601 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 OR6N1Q8NGY5 312 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 ABHD3Q8WU67 409 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 NSMAFQ92636 917 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 PGLYRP3Q96LB9 341 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 FOXN4Q96NZ1 517 aa14.31□□□□□ -0.12
TMEM220-202ENST00000455996 OR8B4Q96RC9 309 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms