RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ADGRA1Q86SQ6 560 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OR52L2PQ8NGH6 319 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TAC3Q9UHF0 121 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 DNPH1O43598 174 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 CD200P41217 278 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 PRLHRP49683 370 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 EMP2P54851 167 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 DGKZQ13574 1117 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 HTR4Q13639 388 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 RNF151Q2KHN1 245 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 NRARPQ7Z6K4 114 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 C12orf57Q99622 126 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 GALPQ9UBC7 116 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 IL20RAQ9UHF4 553 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 C8AP07357 584 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ANKRD34CP0C6C1 535 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 SYN1P17600 705 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 GCH1P30793 250 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 PSMB10P40306 273 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 FASLGP48023 281 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 BTNL3Q6UXE8 466 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 DOK3Q7L591 496 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 CLEC1AQ8NC01 280 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 FAM71CQ8NEG0 241 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 FBXL12Q9NXK8 326 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 VDAC3Q9Y277 283 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 CST4P01036 141 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 SNRPEP62304 92 aaKnown RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 RPS15P62841 145 aaKnown RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 GPR18Q14330 331 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 THEM4Q5T1C6 240 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 SIGIRRQ6IA17 410 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 MRPL21Q7Z2W9 205 aaKnown RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ANGPTL5Q86XS5 388 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OR2AE1Q8NHA4 323 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TVP23CQ96ET8 276 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 PITPNC1Q9UKF7 332 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 PIAS1O75925 651 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF28P17035 718 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 LSSP48449 732 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 IRF9Q00978 393 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TLE1Q04724 770 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 SLC35G1Q2M3R5 365 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF542PQ5EBM4 170 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 NAXEQ8NCW5 288 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM106AQ96A25 262 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM231Q9H6L2 316 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 RASL12Q9NYN1 266 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 KDM4EB2RXH2 506 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF264O43296 627 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 HLA-BQ31612 363 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 L3MBTL4Q8NA19 623 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TFAP2BQ92481 460 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 NDRG1Q92597 394 aaKnown RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 UTP23Q9BRU9 249 aaKnown RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 MARVELD1Q9BSK0 173 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 GHITMQ9H3K2 345 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 SFXN1Q9H9B4 322 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 KIAA1549Q9HCM3 1950 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 FOLR1P15328 257 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 PKIAP61925 76 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 UBE2G1P62253 170 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 PJVKQ0ZLH3 352 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OR8B8Q15620 311 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 Q3ZCU0 254 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TEX261Q6UWH6 196 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 APCDD1Q8J025 514 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OR4K13Q8NH42 304 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OR10J5Q8NHC4 309 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 PAQR8Q8TEZ7 354 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 NPRL2Q8WTW4 380 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 CCDC120Q96HB5 630 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 BOD1Q96IK1 185 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 MRGPRX2Q96LB1 330 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 FAM198AQ9UFP1 575 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 U3KQ87 197 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ABCA12Q86UK0 2595 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM210A6NLX4 147 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 APOA2P02652 100 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 C19orf57Q0VDD7 668 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 UNC50Q53HI1 259 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 DPPA4Q7L190 304 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 CLEC14AQ86T13 490 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 RPS19BP1Q86WX3 136 aaKnown RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 FAM156AQ8NDB6 213 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OLIG1Q8TAK6 271 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 BCL2L10Q9HD36 194 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 THYN1Q9P016 225 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF541Q9H0D2 1346 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 A0A087WV62 115 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 RFPL4AA6NLU0 287 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 ALG1L2C9J202 215 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 RFPL4AL1F8VTS6 287 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 MPPED1O15442 326 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 GPX3P22352 226 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 SH3BP2P78314 561 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 COL19A1Q14993 1142 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM97Q5BJF2 176 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms