RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 RAP1AP62834 184 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 PPP1R8Q12972 351 aaKnown RBP21.48■■□□□ 1.03
MSH2-203ENST00000454849 ANKDD1AQ495B1 522 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 SLC36A2Q495M3 483 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 THEM4Q5T1C6 240 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 OTPQ5XKR4 325 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 BIVMQ86UB2 503 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 ZCCHC24Q8N2G6 241 aaKnown RBP21.48■■□□□ 1.03
MSH2-203ENST00000454849 NABP1Q96AH0 204 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 THTPAQ9BU02 230 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 RERGLQ9H628 205 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 DENND2DQ9H6A0 471 aaPredicted RBP21.48■■□□□ 1.03
MSH2-203ENST00000454849 SIAEQ9HAT2 523 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 IER3IP1Q9Y5U9 82 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 ARFGEF3Q5TH69 2177 aa21.48■■□□□ 1.03
MSH2-203ENST00000454849 RTTNQ86VV8 2226 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 OR10H3O60404 316 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 NDUFB2O95178 105 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 SCG5P05408 212 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 SNRPD2P62316 118 aaKnown RBP21.47■■□□□ 1.03
MSH2-203ENST00000454849 MRPS34P82930 218 aaKnown RBP21.47■■□□□ 1.03
MSH2-203ENST00000454849 DBPQ10586 325 aaPredicted RBP21.47■■□□□ 1.03
MSH2-203ENST00000454849 TRIM25Q14258 630 aaKnown RBP21.47■■□□□ 1.03
MSH2-203ENST00000454849 MESTQ5EB52 335 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 ZNF525Q8N782 197 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 SLC30A7Q8NEW0 376 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 ZNF570Q96NI8 536 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 BARX1Q9HBU1 254 aaPredicted RBP21.47■■□□□ 1.03
MSH2-203ENST00000454849 TMCC3Q9ULS5 477 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 CSPG4Q6UVK1 2322 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 ZANQ9Y493 2812 aa21.47■■□□□ 1.03
MSH2-203ENST00000454849 TMEM129A0AVI4 362 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 H7C417 338 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 SOCS2O14508 198 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 FAM157BP0CG42 384 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 BMP4P12644 408 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 APEX1P27695 318 aaKnown RBP21.46■■□□□ 1.03
MSH2-203ENST00000454849 LAP3P28838 519 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 FAM205BPQ63HN1 556 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 FAM122BQ7Z309 247 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 AKR7LQ8NHP1 331 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 SORCS2Q96PQ0 1159 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 REG4Q9BYZ8 158 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 SMURF2Q9HAU4 748 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 CCNB1IP1Q9NPC3 277 aa21.46■■□□□ 1.03
MSH2-203ENST00000454849 KRCC1Q9NPI7 259 aaPredicted RBP21.46■■□□□ 1.03
MSH2-203ENST00000454849 IGHV4-30-2A0A087WSY4 118 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 SLC22A23A1A5C7 686 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 B9A039 149 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 XKRYO14609 159 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 ENTPD5O75356 428 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 MMP7P09237 267 aaPredicted RBP21.45■■□□□ 1.02
MSH2-203ENST00000454849 ZNF32P17041 273 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 GALK2Q01415 458 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 HSF2Q03933 536 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 KRR1Q13601 381 aaKnown RBP21.45■■□□□ 1.02
MSH2-203ENST00000454849 PABPC1L2AQ5JQF8 200 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 LRP11Q86VZ4 500 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 ARHGAP24Q8N264 748 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 CPEB3Q8NE35 698 aaKnown RBP21.45■■□□□ 1.02
MSH2-203ENST00000454849 SYT3Q9BQG1 590 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 KCNN2Q9H2S1 579 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 PLK3Q9H4B4 646 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 ZNF442Q9H7R0 627 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 EMC7Q9NPA0 242 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 PRPF19Q9UMS4 504 aaKnown RBP21.45■■□□□ 1.02
MSH2-203ENST00000454849 C2CD3Q4AC94 2353 aa21.45■■□□□ 1.02
MSH2-203ENST00000454849 TLN2Q9Y4G6 2542 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 PPP1R3DO95685 299 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 CCNOP22674 350 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 EFNA4P52798 201 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 PLP2Q04941 152 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 EFNB3Q15768 340 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 LCN8Q6JVE9 175 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 UGT2A3Q6UWM9 527 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 FANK1Q8TC84 345 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 MRPL37Q9BZE1 423 aaKnown RBP21.44■■□□□ 1.02
MSH2-203ENST00000454849 NDEL1Q9GZM8 345 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 CDH20Q9HBT6 801 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 NRIP3Q9NQ35 241 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 VNN3Q9NY84 501 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 CMAHPQ9Y471 501 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 SPEF1Q9Y4P9 236 aa21.44■■□□□ 1.02
MSH2-203ENST00000454849 PRSS37A4D1T9 235 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 VSTM5A8MXK1 200 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 TNFRSF11BO00300 401 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 MGRN1O60291 552 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 NR2C1P13056 603 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 CTLA4P16410 223 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 CARTPTQ16568 116 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 SMARCD3Q6STE5 483 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 DNM1P46Q6ZS02 220 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 PTCHD4Q6ZW05 846 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 OR9Q2Q8NGE9 314 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 SAMD8Q96LT4 415 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 ERMAPQ96PL5 475 aaPredicted RBP21.43■■□□□ 1.02
MSH2-203ENST00000454849 DOK1Q99704 481 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 RHNO1Q9BSD3 238 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 FBXL3Q9UKT7 428 aa21.43■■□□□ 1.02
MSH2-203ENST00000454849 LYVE1Q9Y5Y7 322 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms